Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01537 ATGATTGAAAAATCCTCCAAACTCCCTGCAAAATCTTCTCACGCAAGGTTGACGCTTGTGCTTCCCCATGGTGTTGTTCTTGTGATGGGTTGTCTTGTTATGGGGTGGAGATACAAGGCAGGGTTGTTCCTCATACTTACTGTGGTTATCATATGGGTCTCCTCTGCTGAAGTCACCCAGGTGAGATTGGAAGTTCCATTGGCTAGAACGATTTGTTTGCAAAGAATAGTTAGCCTAAAACCATGCAGTCCTCTTGGCTTAGATTTTATGAAAATTGCAGACCTGCATTATAATGTGTCGCTGAGGGGACCACTATTCCGAATTTCTATATCTGAATCCTTATCTAAGCATGGCCAACCTTTCTCTTTTGATGAAACTGTTGAAGATATTTTTATAGATTACAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCCTTCATTAAGGACTGCTTGTATAAGTTATTTAAACACCGCTCTAAAACTGGAAAAAATGCAAAAGTTGTGGATGAGTATTCTATCAGGATCACCTCTCCTCACAAGGGCACTGGAATGCAAAAGAACGCTGAAGTGGAATTGGGGAACGTGACTCGAAAAGATAGTGATGCAGACCTTTCAATACATGAAGAATCAAAGCCATTGGTGGCTAAACATGGTGATGCTAATGCTACAAAGGCAGAGAAAGAACTTACTACAAGAGAAATTGCAACTTATGGATTTTACCTTGCACCTATCTGGTTTGTAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACGAGTGTTGCAAGCACAACAGTGTTGTCATCTACTTCAGGACTCTTCACTCTCTTCATTGGTGTGTTTATGGGCCAAGAGGCTTTAAATGCAGCAAAAGTAATTGCTGTCTTTGTCAGCATGGCTGGGGTTGTGTTGACAACTCTGGGGAAAACATGGGCTGCAGATGATGCTGAATCAAGTGCTTCCAATGGACAGCACTCTGTTGTTGGTGATCTCCTCGGCCTTCTCTCAGCCGTGTCATATGGTCTATTTACAGTTCTTCTCAAAAAAGTTTCTGGTGAAGAAGGAGAACGGGTTGATGTGCAAAAACTGTTTGGATATATTGGATTGTTTACACTTCTAGCACTATGGTGGCTTATCTGGCCATTGTCAGCCTTAGGAGTTGAACCCAAGTTTACGATTCCCCATTCGGTTAAAGTGGACGAGGTGGTACTTGCCAATGGATTTATTGGAAGTGTTCTCTCAGACTACTTCTGGGCACTCTGTGTTGTATGGACAACTCCCCTTGTGGCCACTCTGGGCATGTCACTCACCATTCCTCTTGCTATGTTGGCTGACATGTTGATCCATGGTCGGCATTATTCAGTATTGTACATTCTTGGCTCAGCTCAGGTATTTGCAGGCTTTGTGATAGCTAATATTTCAGATAAGTTAACCATAAAGGAGATTTCATCTCGTCATGAATACGAGAGAGTTTCTCTTATGACAATATGA 1521 0.4227 MIEKSSKLPAKSSHARLTLVLPHGVVLVMGCLVMGWRYKAGLFLILTVVIIWVSSAEVTQVRLEVPLARTICLQRIVSLKPCSPLGLDFMKIADLHYNVSLRGPLFRISISESLSKHGQPFSFDETVEDIFIDYKQPFAVTYLGASLMVVYLPIAFIKDCLYKLFKHRSKTGKNAKVVDEYSIRITSPHKGTGMQKNAEVELGNVTRKDSDADLSIHEESKPLVAKHGDANATKAEKELTTREIATYGFYLAPIWFVTEYLSNAALARTSVASTTVLSSTSGLFTLFIGVFMGQEALNAAKVIAVFVSMAGVVLTTLGKTWAADDAESSASNGQHSVVGDLLGLLSAVSYGLFTVLLKKVSGEEGERVDVQKLFGYIGLFTLLALWWLIWPLSALGVEPKFTIPHSVKVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMLIHGRHYSVLYILGSAQVFAGFVIANISDKLTIKEISSRHEYERVSLMTI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01537 506 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Spst8g01537 506 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 319 - -
Spst8g01537 506 Pfam EamA-like transporter family 237 316 IPR000620 GO:0016020
Spst8g01537 506 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 36 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01537 Spst-Chr8 16491569 16498506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01537 K15289 - gmx:100776833 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01537 8 16491569 16498506 Spst9g00764 9 6542636 6552248 PCT