Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00730 ATGTTCCGTAAGCTTGTGTCAGGGCCGCGCAAGAACAAGCCTGGTACTGTCCCCGTTCACCTCAATGTTTATGATCTCACCCCAATCAATGGTTATGCCTATTGGCTTGGCCTTGGTGTCTACCACTCTGGGGTTCAAGTTCATGGAGTTGAGTACGGTTTTGGTGCGCACGAGCATGACACAACGGGGATTTTTGAAGTGCAACCGAAACACTGTCCCGGGTTCACTTTCAGAAAGTCGATTTTCATCGGAACAACAGATCTGGGTCCCAAAGATGTTCGCGCGTTCATGGAGAAACTGGCTCAGGAATACTCTGGCAACACCTATCATCTCATCTCCAAAAATTGCAACCACTTCTGTAACGATGTTTGTCTCAAGTTAACGGGAAAGTCAATCCCTCGATGGGTAAACCGCCTTGCTCGACTCGGTCTTCTGTGCAACTGTGTTCTCCCACCTGGCCTAAATGAGACAAAGGTTCCCCAAGCTACATCAGACAGAGTTCAGGAGGGAGAAAAGAGGAAAATGAGAAGTCAATCCTGCAGATACGAGGGTTCCTCCAATCCTTCATGGTCTCGACGTGCAGCAATTAAAAGTAGTAGCCAAAGACATTGCCTTCGTCCATCTTCATCTTTGCTTAATGCTGCTTCAACCTCAACCTTAACAGTGAAGTAG 672 0.4762 MFRKLVSGPRKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGPKDVRAFMEKLAQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNETKVPQATSDRVQEGEKRKMRSQSCRYEGSSNPSWSRRAAIKSSSQRHCLRPSSSLLNAASTSTLTVK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00730 223 MobiDBLite consensus disorder prediction 159 193 - -
Spst9g00730 223 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Spst9g00730 223 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Spst9g00730 223 MobiDBLite consensus disorder prediction 165 179 - -
Spst9g00730 223 Gene3D PPPDE domains 12 172 IPR042266 -
Spst9g00730 223 PANTHER DESUMOYLATING ISOPEPTIDASE 16 197 IPR008580 GO:0008233
Spst9g00730 223 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00730 Spst-Chr9 6277212 6278850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00730 K22763 - gmx:100306675 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01505 8 15790090 15791957 Spst9g00730 9 6277212 6278850 PCT