Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01505 ATGTTGTGTAAACTCGTTCCTATGCCGCGCAAGAAAAAGCCCGGTTCGAACCCGGTTTACCTTAACGTCTACGACCTAACCCCAATTAACGGCTATGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGTGTTCAAGTTCATGGGGTTGAATATGGATTTGGAGCTCATGACCGTGACACGACAGGGATTTTTGAAGTGGAGCCTAGATTCTGTCCTGGATTTACCTTCAGGAAATCGATTTTAATTGGATCGACGGACATGGGGGCGAAGGATGTTCGAGCGTTAATGGAGAGGATGGCTGAAGATTATTCTGGGAACACCTACCACCTTATCCAGAAAAACTGCAACCACTTCTGCAATGATGTTTGTGTCAAACTAACGGGGAAGTCTATCCCTCGTTGGGTGAATCGACTTGCAAGAATTGGTTTTCTTTGCAACTGTGTTCTTCCGCCCAGCCTAAACGAAACAAAGGTTCGCCAAGTTACGTTGGAGAGGGTTCGAGATGGAGAGAAGAAGAAAATGAGAAACCAGTCCAGCAGTTCAGTAAAGCTTCGACATGAGTCGGTCAAAGTTGGACATATAGGCTGTTAG 594 0.4613 MLCKLVPMPRKKKPGSNPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHDRDTTGIFEVEPRFCPGFTFRKSILIGSTDMGAKDVRALMERMAEDYSGNTYHLIQKNCNHFCNDVCVKLTGKSIPRWVNRLARIGFLCNCVLPPSLNETKVRQVTLERVRDGEKKKMRNQSSSSVKLRHESVKVGHIGC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01505 197 Gene3D PPPDE domains 12 173 IPR042266 -
Spst8g01505 197 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Spst8g01505 197 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Spst8g01505 197 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Spst8g01505 197 PANTHER DESUMOYLATING ISOPEPTIDASE 16 182 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01505 Spst-Chr8 15790090 15791957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01505 K22763 - gmx:100786432 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01505 8 15790090 15791957 Spst9g00730 9 6277212 6278850 PCT