Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00144 ATGAGACACGAAAACACACAAATTGACGGAATCAATCAAACATTCAAACCCAACCCACCTAGTAGATCCGCTCACCCAGAAACCTCTCGAATGGAGGCAAGTGGCGGTGGTGGTGGCGGTGCTCCGTCGTCTGAGCCGGTCAAGCAATATTTGCAGGAGTTCTCCAAGCTGTTTCAGTACTATCTGGACAAATCTACCCCTCATTCCGCGTACAGATGGATTGGGACATTGGTCATCGCATCCATCTACATCTTGCGTATTGTTTATGTGCAGGGGTTTTACGTTGTCTCTTACGGCCTTGGAATCTACCTTCTCAATCTCTTGATTGGTTTTCTCTCCCCTTTGGTTGATCCAGAGATCGATCCCTCCAACTCCCCTTTGCTTCCCACCAAAGGATCCGATGAGTTCAAACCCTTCATTCGCCGCCTCCCTGAGTTCAAGTTCTGGTATTCTTTCACCAAGGCTCTCTGCATAGCGTTTGTAATGACCTTCTTTTCCCCGTTTGATGTTCCTGTGTTTTGGCCTATATTACTCTGTTACTGGTTTGTTCTCTTTGTCCTTACAATGAGGCGCCAAGTTGCACACATGATCAAATACAAATATATCCCATTTAACTTGGGGAAGCAGAAGTATGGCGGTAAGAAATCTTCTGCAGGCAAAGTTAATTTGTCGCTTTCGCTTTCTGTCTGCCCCAACCATATCGTTAAGGATTAG 714 0.4608 MRHENTQIDGINQTFKPNPPSRSAHPETSRMEASGGGGGGAPSSEPVKQYLQEFSKLFQYYLDKSTPHSAYRWIGTLVIASIYILRIVYVQGFYVVSYGLGIYLLNLLIGFLSPLVDPEIDPSNSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSPFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYGGKKSSAGKVNLSLSLSVCPNHIVKD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00144 237 PANTHER PROTEIN RER1 43 217 IPR004932 GO:0016020
Spst9g00144 237 Pfam Rer1 family 51 212 IPR004932 GO:0016020
Spst9g00144 237 MobiDBLite consensus disorder prediction 1 44 - -
Spst9g00144 237 MobiDBLite consensus disorder prediction 7 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00144 Spst-Chr9 1210566 1212903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00144 31 222 Miscellaneous Gene Families AT4G39220 71.503 1.75e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00144 - - gmx:100499765 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00144 9 1210566 1212903 Spst9g00144 9 1210566 1212903 ECH
Spst9g00144 9 1210566 1212903 Spst3g04056 3 91495972 91498044 ECH