Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00002 ATGAGTGGAGCTGTTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTACTGCAAGGATGGGATAATGCGACTATTGCAGGATCTATCTTGTACATAAAAAGGGAGTTTCAATTAGAAAGTCAACCTACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTGGTTACCACATGCTCTGGAGCCCTATCGGACTTGCTAGGCCGACGTCCTATGTTGATTATTTCCTCTCTCCTTTATTTTGTTAGTTCTCTTGTGATGCTATGGTCTCCAAATGTTTATATCCTCCTCTTTGCAAGGCTTTTAGATGGTTTGGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTTACTGGTTCCGCGGGAATGTTTTTCTCCTATTGTATGGTGTTTGGGATGTCACTGACAAAGGCGCCAAGCTGGAGACTCATGTTGGGTGTACTTTCAATCCCTTCTCTTATTTATTTTGCACTGACACTGTTGTTCTTGCCTGAGTCTCCGAGATGGCTTGTTAGTAAAGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGCCTTCGTGGAATGGAAGATGTTGCCGGTGAAATGGCTTTACTGGTTGAGGGTCTTGGAGTTGGAGGTGATACAGCCATAGAAGAGTATATAATTGGTCCAGCCAATGAACTTGGTGATGAAGAGGATCCGCACACAGAAAAGGATCAGATTAAGTTGTATGGACCTGAACAAGGTCAGTCCTGGGTTGCTAGACCTGCTGCTGGACAAAGTTCGATTGGCCTTATATCTCGGAAAGGAAGCATGGCAAATCCGAGTGGTATAGTGGACCCACTAGTGAACCTCTTTGGTAGTGTTCATGAGAAGGTCCCGAAAACAGGAAGCATGGGAAGCACCCTTTTCCCACACTTTGGGAGTATGTTTAGTGTTGGGGGAAATCAGCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCCAGAGAGGGTGATGATTATGTCTCTGATGCTGCAGCCGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCACGTCAAACAACGAGTCTGGATAAGGACATACCTCCTTCTGCTCACAACAACCTTTCAAGCACGAGGCAAGGTAGTCTTTTGCATGGAAATGCAGGAGAACCCACTGGTAGTACCAGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGACTGAAAGAGAGGGCCCAGATGGAAACAAGGAAAGTGGCTTCAAGAGAATATATTTACACCAAGATGGTGGTTCTGGAGTGCGTGGGTCTGTGGTTTCGCTCCCTGGTGGTGATTTACCAAATGATGGTGAGGTTGTACAGGCTGCTGCTTTGGTGAGTCAGCCAGCCCTTTATAACAAGGAGCTTATGCATCAACGACCAGTTGGACCAGCTATGATTCATCCATCTGAAACAACTGTGAAAGGGCCAAGTTGGAGTGACCTTTTTGAACCTGGGGTGAAGCATGCATTAATTGTGGGGGTGGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGAGTCCTCTACTACACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAACCTAGGCCTTAGTTCGACTTCTTCATCCTTTCTTATTAGTGCGGTGACAACCTTGTTGATGCTTCCTTGTATAGCTGTTGCCATGAGGCTCATGGATATATCTGGCAGAAGTACCTGGCAATGCGATGCCTTGTGTCTTTTCCCATTGCTCGTTTTTATTCTGTCAATTGCAATGCTTCTTAGTGATACTCTGCTTTTTCCTTTCTGCAGGACTTTACTGCTTAGTACAATTCCCGTCCTAATAGTTTCTCTTCTCATATTAGTCCTGGGGAGTCTTGTGGATTTGGGCAGCACTGCAAATGCATCAATCTCAACCATTAGTGTTATTGTATATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGTCTCTGCATTGCCATTTGTGCTCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTACCAGTTATGCTCAATTCTGTAGGCCTCGCTGGTGTTTTTGGTATTTATGCTGTCGTGTGCTTCATATCATGGGTGTTTGTCGTTTTGAAAGTTCCAGAAACAAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAGATTGACGATGCCAAAGTACAACTGACCTAA 2322 0.4496 MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKREFQLESQPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSLLYFVSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLFLPESPRWLVSKGRMLEAKKVLQRLRGMEDVAGEMALLVEGLGVGGDTAIEEYIIGPANELGDEEDPHTEKDQIKLYGPEQGQSWVARPAAGQSSIGLISRKGSMANPSGIVDPLVNLFGSVHEKVPKTGSMGSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLQSPLISRQTTSLDKDIPPSAHNNLSSTRQGSLLHGNAGEPTGSTRIGGGWQLAWKWTEREGPDGNKESGFKRIYLHQDGGSGVRGSVVSLPGGDLPNDGEVVQAAALVSQPALYNKELMHQRPVGPAMIHPSETTVKGPSWSDLFEPGVKHALIVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRSTWQCDALCLFPLLVFILSIAMLLSDTLLFPFCRTLLLSTIPVLIVSLLILVLGSLVDLGSTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSVGLAGVFGIYAVVCFISWVFVVLKVPETKGMPLEVIIEFFSVGAKQIDDAKVQLT 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00002 773 Gene3D MFS general substrate transporter like domains 2 253 IPR036259 -
Spst9g00002 773 Pfam Sugar (and other) transporter 502 755 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 5 762 - -
Spst9g00002 773 MobiDBLite consensus disorder prediction 373 410 - -
Spst9g00002 773 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 SUPERFAMILY MFS general substrate transporter 6 752 IPR036259 -
Spst9g00002 773 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 PRINTS Sugar transporter signature 682 694 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 PRINTS Sugar transporter signature 659 680 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 PRINTS Sugar transporter signature 527 537 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst9g00002 773 MobiDBLite consensus disorder prediction 373 402 - -
Spst9g00002 773 Gene3D MFS general substrate transporter like domains 479 760 IPR036259 -
Spst9g00002 773 FunFam monosaccharide-sensing protein 2 2 249 - -
Spst9g00002 773 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 747 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00002 Spst-Chr9 34221 39411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00002 1 769 Organic Solute Cotransporters AT4G35300 70.039 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00002 - - gmx:100793265 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00002 9 34221 39411 Spst9g00002 9 34221 39411 ECH
Spst9g00002 9 34221 39411 Spst3g03704 3 87048097 87051557 ECH