Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03704 ATGGTGTTCTTCTTGTCTTTGAAGGAGTCCCCAAGTTGGAGAGCAATGCTTGCTGTTGTGTCTATTCCTTCTGTTGCTTACTTTTTTCTAGCTGTGTTTTATCTCCCTGAATCTCCTCCTTGGCTTGTGAGTAAAGGGAGAATCACTGAGGCTAAGAAAGTTCTGCAAAGACTTCGCGGCACCGAAGATGTTTCAGGGGAACTGGCCTTGCTGGCTGAGGGTATGAGTCCAGCGAGTGAAAGCACCACTGTAGAAGAGTACATAGTAACCCCTGCCTGTGATATCATGGCCAACAAGGAAGCAGGGAGGGATTGCATAAAGCTCTATGGACCCAACCAAGGAGGAGTTTCAATGGTTGCCCAACAAGTGAGTGGACAAGCTAGCATGTCATCTCGCAGCATGTTAGGCTTGTCTCGCCATGGAAGCGTTATTGCTCAGGCTGAAAATCTCAAAGACCCTCTAGTCAATCTCTTTGGGAGCATCCATGACATCAATCCCCCCGTCCTTGAGCCTGGTGGTTCAAGAGCCATGCTAATGGGAGACACATATCAGAGCACTGACAATTTGAATGCTCCTTTACTTTCATCACAAGGCATTGTTGTGGACAGGGACAAGGCTTTAGGAACAGGGACTAATGATGGAAACCTAGTACCTAAGAACACTGACATCGGTGGAGGTTGGAAATTGGTTTATAAATCAGCTGAGAGTGGGAAAAAAGAAGGGGGGCTCCAAAGGGTTTATCTGCGTGCAGATCCTAATGTAGTACCTCAACAAACTTCATTTTATGAGGGCCATGACATGAATGCAGATGGTAGTGAGGCTTTTCAGGCATCTGCACTTGTCAGCCACTCAGTTCTCTGCCCTAAGAATATGAGCACGAAACCAGAAAATGCTGCCAAACGTACAGGTTTTGCTGGTTTGTTAGATATAGGAGTCAGGCGGGCATTAGTTGTTGGAATTGGACTACAAGTTCTTCAGCAGGCTGCTGGCATAAATGGATTTCTATACTATGCTCCCCAGATTCTTGACCAGGCAGGTGTTGGGGCTCTTCTGTCAAATTTCGGAATTAGTTCAACATCTGCTTCATTACTTGTAAATATCGTTACAACATTCGCAATGCTTCCTTGTATAACCATTTCCATGAGGCTCATGGATGTTGCTGGCAGGAGTCAACAAAAAATGGCGAGCCACATGAATACTCCATCCAAAAGTCATACCTTCAGTGATGTTCGGTCGGAAACATGCGAGGTTGAAGAGAGTTGCTGCAGCCATAACTTCTCCTTCATGATTCCTAAAGATCACCCCATACATGTGCCACGTCCCATCTTGACAAAGGCATCAAAATCACTTTTCTTAGCTAAAATTTGTGGCATACTCCGGGACTTGTTTCACATGAGTTCTACCCTCAATGCAATAGTCACTGCAATGAGTGTGATGGTATATGAAAGCTGCTTCTGCATGGGGTTGGGAGCAATTCCCAACATCTTGTGTTCAGAAATCTTCCCAACAAGTGTTCGTGGAATATGCATTTCTATTTGCTCCCTTACGTTCTGGATCAGCATCTTGGTAGTGACTTCTTCCTTTCCCCACTTGCTCCATGTCCTTGGGCTAACCGGGGTATTTGGATTATTCGTAATTGGGTGCATCGCTGCATGGATATTTGTCTACTTGAAAGTTCCTGAAACAAAGGGCATGCCTTTAGAAGTCATCATTGATTTCTTTGCTGTTGGTTCAAAGCCTGAATGA 1746 0.4513 MVFFLSLKESPSWRAMLAVVSIPSVAYFFLAVFYLPESPPWLVSKGRITEAKKVLQRLRGTEDVSGELALLAEGMSPASESTTVEEYIVTPACDIMANKEAGRDCIKLYGPNQGGVSMVAQQVSGQASMSSRSMLGLSRHGSVIAQAENLKDPLVNLFGSIHDINPPVLEPGGSRAMLMGDTYQSTDNLNAPLLSSQGIVVDRDKALGTGTNDGNLVPKNTDIGGGWKLVYKSAESGKKEGGLQRVYLRADPNVVPQQTSFYEGHDMNADGSEAFQASALVSHSVLCPKNMSTKPENAAKRTGFAGLLDIGVRRALVVGIGLQVLQQAAGINGFLYYAPQILDQAGVGALLSNFGISSTSASLLVNIVTTFAMLPCITISMRLMDVAGRSQQKMASHMNTPSKSHTFSDVRSETCEVEESCCSHNFSFMIPKDHPIHVPRPILTKASKSLFLAKICGILRDLFHMSSTLNAIVTAMSVMVYESCFCMGLGAIPNILCSEIFPTSVRGICISICSLTFWISILVVTSSFPHLLHVLGLTGVFGLFVIGCIAAWIFVYLKVPETKGMPLEVIIDFFAVGSKPE 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03704 581 Pfam Sugar (and other) transporter 461 570 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst3g03704 581 Pfam Sugar (and other) transporter 309 382 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst3g03704 581 Pfam Sugar (and other) transporter 9 78 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst3g03704 581 SUPERFAMILY MFS general substrate transporter 471 568 IPR036259 -
Spst3g03704 581 SUPERFAMILY MFS general substrate transporter 9 389 IPR036259 -
Spst3g03704 581 Gene3D MFS general substrate transporter like domains 440 580 IPR036259 -
Spst3g03704 581 Gene3D MFS general substrate transporter like domains 294 398 IPR036259 -
Spst3g03704 581 Gene3D MFS general substrate transporter like domains 1 142 IPR036259 -
Spst3g03704 581 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 11 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03704 Spst-Chr3 87048097 87051557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03704 1 581 Organic Solute Cotransporters AT3G51490 42.902 1.05e-152 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03704 - - tpra:123881435 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03704 3 87048097 87051557 Spst3g03704 3 87048097 87051557 ECH
Spst9g00002 9 34221 39411 Spst3g03704 3 87048097 87051557 ECH
Spst3g03704 3 87048097 87051557 Spst3g03704 3 87048097 87051557 PCT