Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01542 ATGTCCCACCACCAAACCAGCTTGATTCTACCCAATCCCAAGCCCAAGAGCCCTAGCCGCTCCTCCTCCCTCGCCATCATCGACTCTATCTTCGCCAAAAAAAGCCTCTTCTACGACAGGCTTCCTTCCCAACCCCTCCGACTCACCGTCCTCAAACTCGATGGTTCCTCCTTCCATATTCAGGTTCCCAAGACGGCCACCGTTGCGGAACTGAAAGACGCAGTGGAGGCTGTGTTCGCCCACGCGCCTCTAAATGGGCCCGCCCAAATTTCATGGGCGCATGTTTGGGGGCAGTTTTGCTTATGCTATGATGAACAGAAGCTAGTTACGGAGAAGGATCATCTTCGAAATTATGGCATCAAGGATGGTGACCAGCTTCGTTTCACCCGCCATGTTTCAAACAATTGCTGTGTCCAAAGAAAGCGGTTGAAGAAAAGAGTTGTATCTTTGAAACAGCACAGGAGGTGCAAGTCTTCTCAAGTGGATAGCTATCAACACACAGGAAAGTGTGACAATGATGATATTGGTTCTGATGATGATGACGCCACAGATAATGGGAAGCATCATATTGAAGAAGTAGAAGAAGAGCACGTAGTAAAGAACAAATTTGCTGGCTTTGTGGGAGAGTTGTTCTCTTGCACTCCACTAGCAGTTGTAAGAAAAACTACAACTAGAAGCAGGATTTGGCCGTCCACTATTCCCAGATGTTTGGTGGGTAGTTTTAGAAAGATTAGTAGTATTGTACGCATTGGCAGGAGGAGGCCCTATTCTCGTAGACTTACATGGAGACAGTAG 795 0.4755 MSHHQTSLILPNPKPKSPSRSSSLAIIDSIFAKKSLFYDRLPSQPLRLTVLKLDGSSFHIQVPKTATVAELKDAVEAVFAHAPLNGPAQISWAHVWGQFCLCYDEQKLVTEKDHLRNYGIKDGDQLRFTRHVSNNCCVQRKRLKKRVVSLKQHRRCKSSQVDSYQHTGKCDNDDIGSDDDDATDNGKHHIEEVEEEHVVKNKFAGFVGELFSCTPLAVVRKTTTRSRIWPSTIPRCLVGSFRKISSIVRIGRRRPYSRRLTWRQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01542 264 MobiDBLite consensus disorder prediction 1 21 - -
Spst8g01542 264 Pfam Ubiquitin-like domain 46 132 IPR040610 -
Spst8g01542 264 SUPERFAMILY Ubiquitin-like 41 137 IPR029071 -
Spst8g01542 264 CDD Ubl_SNRNP25 46 131 IPR040610 -
Spst8g01542 264 MobiDBLite consensus disorder prediction 163 185 - -
Spst8g01542 264 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 16 249 IPR039690 GO:0000398|GO:0005689
Spst8g01542 264 Gene3D - 41 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01542 Spst-Chr8 16687043 16690288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01542 - - gmx:100820296 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01542 8 16687043 16690288 Spst8g01542 8 16687043 16690288 ECH
Spst9g00774 9 6655692 6659024 Spst8g01542 8 16687043 16690288 ECH
Spst8g01542 8 16687043 16690288 Spst9g00774 9 6655692 6659024 PCT