Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01432 ATGCATCGCCTTATTGTAAAGCCTAAATATGTCTCTTCACCACGTGGATCCTTCTTGTTGCTTGATGGCGTGTTTGGAACTGTGTTCAAGAGGATTGGACGTAGAATGAACATGTTATCAACTCAAGTTTGCGTTAGTGTTTGTTGGCCATATTTTGATCCGGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGACAATGATAGTTGCCATGATTGTACACTTATCAAGTTTGATAGCATTAACAAACCTGGAATTCTGCTAGAAGTGGTCCAAATCCTGACAGACCTTGACTTCACAATTACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACCGATCAGCAAGGAAAGAAGATAACAGACAGCAAAACAATAGACTTCATTGAAAAGTCTCTAGGACCAAAGGGCCAGAGTACAGAAGGAGTGAAGAGTTGGCAATGCAAAAGGGTTGGATTTCACTTAGTTGGTGATCATACAGCCATTGAGCTCATTGGAAGGGACCGCCCCGGTCTCTTGTCTGAGATATCAGCAGTCCTTGCCAGCCTCCAATTCAATGTGATTGCTGCTGAAGTTTGGACTCATAACAGGAGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAACCATGGATGAATCAAAAAGATTGTCTATCATGGAAGAGCAGCTCAACCACATCCTACGCGGGTGTGAGGATGATGAGAAAGTGGCTAGGACCAGTTTCTCAATGGGTTTCACCCACATGGATCGGAGGCTCCACCAAATGCTATTTGCTGATAGGGACTACGAAAGTTCTGGAGTAACAACAACAGATGTTGATTCTACTCCTTCTTTTAGGCCAAAAATCAGAATAGAACGTATTGTGGAAAAAGGGTACTCAGTGGTTAGTGTAAAATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTTTGCACTCTCACCGACATGCAGTATGTGGTTTTCCATGCTACAATTTCATCGGAAGGGCAATATGCATCCCAGGAGTACTTTATCCGGCACATGGACGGATGCACGCTTGATACTGAGGGAGAGACAGAAAGGGTCACCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTTAGCGAGGGTGTGAGCCTTGAACTGTGTGCAAAGGACAGAGTGGGGTTGCTGTCTGAAGTGACAAGGATTTTACGAGAGAACGGCATAACAGTTAGTAGGGCAGGTGTGTCAACCATAGGGGAGAAAGGGTTAAATGTGTTCTACGTGAGAGATGCATCTGGGAACCCAGTGGACATGAAGATCATCGAAGCATTACGCAAGGAAATTGGACAGACAGTGATGGTCAATGTGAAGAGGGAACCAGGCAGTGCCAAAGCACCAGCTGAAACCCGAGGATGGGCTAAAACAGGCTTCTTCTTTGGGAACTTGTTGGAAAGGTTCTTGACTTGA 1476 0.4417 MHRLIVKPKYVSSPRGSFLLLDGVFGTVFKRIGRRMNMLSTQVCVSVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFTITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKSLGPKGQSTEGVKSWQCKRVGFHLVGDHTAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQTMDESKRLSIMEEQLNHILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYESSGVTTTDVDSTPSFRPKIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGQYASQEYFIRHMDGCTLDTEGETERVTKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGITVSRAGVSTIGEKGLNVFYVRDASGNPVDMKIIEALRKEIGQTVMVNVKREPGSAKAPAETRGWAKTGFFFGNLLERFLT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01432 491 CDD ACT_ACR_1 78 149 - -
Spst8g01432 491 CDD ACT_ACR_4 385 456 - -
Spst8g01432 491 CDD ACT_ACR_3 307 381 - -
Spst8g01432 491 Gene3D - 382 463 - -
Spst8g01432 491 SUPERFAMILY ACT-like 75 149 IPR045865 -
Spst8g01432 491 Pfam ACT domain 173 210 IPR002912 -
Spst8g01432 491 Pfam ACT domain 80 128 IPR002912 -
Spst8g01432 491 Pfam ACT domain 387 447 IPR002912 -
Spst8g01432 491 ProSiteProfiles ACT domain profile. 80 157 IPR002912 -
Spst8g01432 491 SUPERFAMILY ACT-like 169 243 IPR045865 -
Spst8g01432 491 ProSiteProfiles ACT domain profile. 387 464 IPR002912 -
Spst8g01432 491 Gene3D - 171 244 - -
Spst8g01432 491 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 53 460 IPR040217 -
Spst8g01432 491 ProSiteProfiles ACT domain profile. 173 256 IPR002912 -
Spst8g01432 491 SUPERFAMILY ACT-like 383 452 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01432 Spst-Chr8 13524647 13530167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01432 - - gmx:100789044 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01432 8 13524647 13530167 Spst8g01432 8 13524647 13530167 ECH
Spst8g01432 8 13524647 13530167 Spst9g01685 9 17201264 17205654 PCT