Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01019 ATGAAAGGCGCCGGGGAACGGAGCTCGGTGGCGGTTCGATTTGCGGTAACAGCACGGTCTTGTGTTGATGTGGAGCAGGTTTTGTTGTTTATGGTGAAACGACGAGGTCCCATCCCAGGAATTGGCAAGATGGAGAATGAGGCACATAGCATCTCATCTTATATAGGAATAGATGTGAATGAGAAGATGGGTGAGGCACTTGAGTCAAGTGAGAACATCCCACTGTTGCTCACGGAACCTCCTAGTCCTCTCAAAAGGACAGGGACGGTGTGGACAGCAGTGGCACACATAGTGACTGGGGTCATAGGATCGGGAGTGCTGTCTCTGCCATGGAGCACTGCACAGCTTGGTTGGCTTGCTGGCCCATTCTCAATCATTCTTATTGCTTCCATCACTCTCTTCTCTTCTTTCCTTCTATGCAACACTTATCGCCATCCCCACCCTGAGCTAGGTCCAAACAGGAGTGCTTCCTACCTTGATGTGGTCCATTTGCATTTAGGAATAAGTAATGGGCGGCTCAGCGGCCTTCTTGTGAATATAAGTTTGTATGGTTTTGCAATTGCCTTCGTCATTACAACAGCTATCAGCTTAAGAACAATCCAAAATTCATTTTGTTACCACAACGGAGGGAGTGAAGCAACCTGTGAATCTGTAGATGCATATTATATGCTGCTTTTTGGGGCTATCCAAATTGTGCTCTCACAGATACCCAACTTTCATAACATCGAATGGTTGTCGGTTGTTGCTGCAATTATGTCCTTTACTTATTCTTTCATAGGAATGGGGCTTTCCATTGCACAAATCATAGAAAAAGGACATGCTGAGGGTAGCATTGGAGGAATCAGTACCTCCAGTGGAACTGAGAAGTTATGGCTGGTTTCTCAAGCTCTTGGTGACATATCATTCTCGTTTCCATTCTCTACAATTATTATGGAAATACAGGATACTTTGAAAGCACCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAGTAATTGCAGTCACTGTCACAACATTTATGTACCTCAGTTGTGGAGGTGCAGGCTATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGGGTTTGAATCCTCTAAGTCTTTCTGGCTTGTGAACTTTGCTAACGTTTGTATAGTTGTTCACCTTGTTGGTTCATATCAGGTGTATTGCCAGCCACTTTTTGCCACTGTTGAGACTTGGTTCCGTTTTAATTTCCCGGATAGTGAATTTGTGAATCACACATATGTCTTGAAACTCCCGTTGCTACCAGCCTTTGAACTTAATTTTCTCAGCCTGTCTTTCAGAACTGCTTATGTTGCATCAACAACTGTGATTGCAATGGTCTTTCCCTACTTCAACCAGATTTTGGGGGTTCTGGGTAGCATAATTTTTTGGCCATTGACCATATATTTTCCGGTGGAAATATATTTGAGTCAGTCCAGTACTGTAGCGTGGACGACTAAGTGGGTCCTGCTTCGGACTTTCAGCATTTTTGGCTTTGTTTTTGGATTGTTCACTCTCACTGGATGTATTAAAGGAATAGTAACTCAAAAAATTGGCTGA 1572 0.4383 MKGAGERSSVAVRFAVTARSCVDVEQVLLFMVKRRGPIPGIGKMENEAHSISSYIGIDVNEKMGEALESSENIPLLLTEPPSPLKRTGTVWTAVAHIVTGVIGSGVLSLPWSTAQLGWLAGPFSIILIASITLFSSFLLCNTYRHPHPELGPNRSASYLDVVHLHLGISNGRLSGLLVNISLYGFAIAFVITTAISLRTIQNSFCYHNGGSEATCESVDAYYMLLFGAIQIVLSQIPNFHNIEWLSVVAAIMSFTYSFIGMGLSIAQIIEKGHAEGSIGGISTSSGTEKLWLVSQALGDISFSFPFSTIIMEIQDTLKAPPPENQTMKKASVIAVTVTTFMYLSCGGAGYAAFGDNTPGNLLTGFESSKSFWLVNFANVCIVVHLVGSYQVYCQPLFATVETWFRFNFPDSEFVNHTYVLKLPLLPAFELNFLSLSFRTAYVASTTVIAMVFPYFNQILGVLGSIIFWPLTIYFPVEIYLSQSSTVAWTTKWVLLRTFSIFGFVFGLFTLTGCIKGIVTQKIG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01019 523 PANTHER OS05G0424000 PROTEIN-RELATED 89 507 - -
Spst8g01019 523 Pfam Transmembrane amino acid transporter protein 86 517 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01019 Spst-Chr8 8824316 8831740 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01019 85 500 Organic Solute Cotransporters AT1G77380 49.761 4.61e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01019 K24917 - gmx:100788056 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01019 8 8824316 8831740 Spst8g01019 8 8824316 8831740 ECH
Spst6g00023 6 510925 513899 Spst8g01019 8 8824316 8831740 PCT