Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00023 ATGAAAGATCAAGAAGGTTCAGCGACTGACAGCACCCCATTGTTGGAGACCCAGTATGCAGCTTATCATCATGTTGAAAGAACTGGGACAGTGTGGACTGCAGTGGCACACATAGTGACAGGAGTGATAGGGTCAGGAGTGTTGTCGTTGGCATGGAGCATTGCACAGCTTGGATGGGTTGGAGGGCCTCTCACAATCGTTTTCTTTGCTTGCATCACTCTCCTCTCTTCTTTCCTTCTCAGCAACACCTACCGTTCTCCAGACCCTGAACATGGTCCTCATAGGAGCTCTTCTTACCTTGATGCTGTTAATCTCCATAAGGGAGAAGGGAATAGTCGTTTCTGTGGCGTTTTTGTGAACGTAAGCTTATATGGCTTTGGAATTGCCTATGTCATTACTGCTGCTATAAGCATGAGAGCAATCCAAATATCAAACTGTTACCATGACAAAGGGGATGAAGCAACAACATGTGGATTTGGGGGTCCATATTTCATGCTTATTTTTGGGGCTATCCAAGTTGTTCTCTCACAGACACCCAACTTCCATAATATTCAATGGTTGTCAATTGTAGCAGCAATTACGTCCTTTCTTTATGCTTTCATAGGAATGTGGCTTTCTGCTGGGCAAATCACGGAAAATGGATATGCTGAGGGTTCCATTGGTGGAATCCCCACTTCCACTGGACTTGAAAAATTATGGTTGGTTGCTCAAGCACTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATAGAAATACAGGATACTTTGAAGTCACCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAACAATATCTGTCATTATCACAACATTTTTCTACCTCTGTTGTGGGTGCTTAGGATATGCAGCCTTTGGTAATGATACACCAGGAAATCTTTTAACAGGGTTTACCTCTAATGCAAAGCATTTTCTTGTAGACTTTGCCAATGCCTGTATAGTGATTCACCTGGTTGGAGCATATCAGGTGTATAGCCAGCCACTTTTTGCAAATGTTGAGAATTGGCTTCGTTTCAAGTTCCCAGACAGTGAATTTGTGAATCACGTATACTTCTTGAGACTCCCTCTGCTGCCAGCTTTCCAACTAAGTTTTCTCAGGCTTTCTTTCAGAACTGCATATGTTGCATCAACAACTGTGATTGCAATGCTCTTTCCCTACTTCAATCAGATTTTGGGAGTTTTGGCTGGAATAATATATTATCCATTATCCATATATTTTCCAGTGGAAATGTACTTGAGTCAGAGCAATATTGAGCCATGGTCGTCCAAGTGGGTCATGCTTAGGGCTTTTAGCGTTATTGGCTTTGTGGTGGGACTCTTCACACTCGTCGGATCCATTGAAGGGATAGTATCTGCAAAACTACACTGA 1398 0.4278 MKDQEGSATDSTPLLETQYAAYHHVERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWVGGPLTIVFFACITLLSSFLLSNTYRSPDPEHGPHRSSSYLDAVNLHKGEGNSRFCGVFVNVSLYGFGIAYVITAAISMRAIQISNCYHDKGDEATTCGFGGPYFMLIFGAIQVVLSQTPNFHNIQWLSIVAAITSFLYAFIGMWLSAGQITENGYAEGSIGGIPTSTGLEKLWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENQTMKKASTISVIITTFFYLCCGCLGYAAFGNDTPGNLLTGFTSNAKHFLVDFANACIVIHLVGAYQVYSQPLFANVENWLRFKFPDSEFVNHVYFLRLPLLPAFQLSFLRLSFRTAYVASTTVIAMLFPYFNQILGVLAGIIYYPLSIYFPVEMYLSQSNIEPWSSKWVMLRAFSVIGFVVGLFTLVGSIEGIVSAKLH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00023 465 PANTHER OS05G0424000 PROTEIN-RELATED 30 456 - -
Spst6g00023 465 Pfam Transmembrane amino acid transporter protein 27 459 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00023 Spst-Chr6 510925 513899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00023 24 460 Organic Solute Cotransporters AT5G09220 48.182 6.31e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00023 K24917 - gmx:100801302 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00023 6 510925 513899 Spst6g00023 6 510925 513899 ECH
Spst6g00023 6 510925 513899 Spst8g01019 8 8824316 8831740 PCT