Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00967 ATGATCAGAAGGCACTCCCTCCTGACTTCCACACCAAAACAACTGTCCCTCCTCTTTGTTAGCCACATGCACTCAACCCTGGTGACTCCATCACCAAAACAAGTGTCCCAAACCCATCAAACCTTCAAACCCAGTTTCACTCCCTCCTTCCCCTTTTCCAGACACAGGGTCAATACCTTGCACACTGGTTCCACTGTAGAACAAATTGAAGTGGATGAAATTGTTGAGGTCGATGTTTGGATGAAGATGCAGGATGAAGCTAGACTTGATGTCACTGTGGAACCCATCTTGTCTAGTTACTACAACACTTTCATTCTCTCTCACGAGTCGTTGCAAACCGCGTTGGCCAATCACCTTGCCGTCAAACTCAGCAGTCCATCCCTTCCTAGCACCACCCTTCATGATCTTTTTGTCGCGGTTTTGGAAACTGATCAAGCCGTCATGGATGCTGTGAAGAGTGACCTGAGGGCAGTGAAGGAGAGAGACCCTGCATGCATAAGCCACGTCCACTGTTTCTTGAATTTCAAAGGCTTTCTCGCATGTCAAGCTCACAGGGTGGCTCACAAATTGTGGCTTCAGGGAAGGGAGATTCTAGCGGTCATGATTCAGAACCGGGTTTCTGAGGTTTTTGCTGTGGATATTCATCCGGGGGCTAAGATTGGAAGTGGGATTTTACTGGATCATGCAACTGGGATTGTGGTGGGAGAGACGGCTGTGATAGGGAACAATGTGTCAATTTTGCATAGTGTGACATTGGGAGGAACGGGTAAGGTTTCTGGGGATAGGCACCCAAAAATTGGTGATGGGGTGCTGATAGGTGCTGGAACTTGTATTTTGGGGAATATTAAGGTTGGTGATGGGGCTAAGATTGGTGCTGGTTCAGTGGTCATCAAGGATGTGCCTCCAAGGACTACAGTTGTTGGGAACCCGGCTAAGCTGGTAGGAGGGAAGAACAACCCTGTTAAGTTGGATAAGATTCCTAGCTTCACCATGGACCATACTTCTCATATTTCTGACTTTTATGATTATTGTGTTTAG 1038 0.473 MIRRHSLLTSTPKQLSLLFVSHMHSTLVTPSPKQVSQTHQTFKPSFTPSFPFSRHRVNTLHTGSTVEQIEVDEIVEVDVWMKMQDEARLDVTVEPILSSYYNTFILSHESLQTALANHLAVKLSSPSLPSTTLHDLFVAVLETDQAVMDAVKSDLRAVKERDPACISHVHCFLNFKGFLACQAHRVAHKLWLQGREILAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGIVVGETAVIGNNVSILHSVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGDGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNNPVKLDKIPSFTMDHTSHISDFYDYCV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00967 345 CDD LbH_SAT 210 310 IPR045304 -
Spst8g00967 345 Gene3D Hexapeptide repeat proteins 213 333 - -
Spst8g00967 345 NCBIfam serine O-acetyltransferase 151 312 IPR005881 GO:0005737|GO:0006535|GO:0009001
Spst8g00967 345 Gene3D serine acetyltransferase, domain 1 62 212 IPR042122 -
Spst8g00967 345 Pfam Bacterial transferase hexapeptide (six repeats) 263 297 IPR001451 -
Spst8g00967 345 SMART SATase_N_2_a 79 183 IPR010493 GO:0005737|GO:0006535|GO:0009001
Spst8g00967 345 PANTHER SERINE ACETYLTRANSFERASE 74 344 - -
Spst8g00967 345 Pfam Serine acetyltransferase, N-terminal 79 183 IPR010493 GO:0005737|GO:0006535|GO:0009001
Spst8g00967 345 FunFam serine acetyltransferase 1, chloroplastic 64 212 - -
Spst8g00967 345 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 272 300 IPR018357 GO:0016740
Spst8g00967 345 FunFam Serine acetyltransferase 213 339 - -
Spst8g00967 345 SUPERFAMILY Trimeric LpxA-like enzymes 79 315 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00967 Spst-Chr8 8498343 8499380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00967 79 341 Miscellaneous Gene Families AT2G17640 52.045 6.87e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00967 K00640 - gmx:100820316 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00967 8 8498343 8499380 Spst8g00967 8 8498343 8499380 ECH
Spst6g01936 6 18812733 18813908 Spst8g00967 8 8498343 8499380 PCT