Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01936 ATGAATGTTCTGGTTTTAGGGCGGTTTTGCACTTCTCCGCTATATAAGACTTCCCCTCTCACTCCTTCCTCAATACAATTCACTCCCATTATTCTTCATCCTTCAAAGCTCCAACCTTTGCCCGTAATTCATCTTTTCTCTCTCTCCATGGCCACTTGCGTTGACGCCCCAACCCCTCTTTCACGCAACCCGAGGGCTCCTCAACCCGATGACCATTCTTTTAATTATATCAAATTCTGTCGACCCACTGACCGCGTCCCCTGCATACCCATTTGCAAGAATCGAGAGATGCCTTTCGCACGTGTGGAGGAGTTGGGTACACGTGGGGAGGGTGGTATTGCTGTTCTTGAGTTTGAGCCTGTTGATCTGTGGTTAAAGATTCAAGAGGAGGCGAGGTTGGATGTGGATCATGAACCTATTTTGTCTAGCTACTATTTCAGTTCCATCTTGTCTCACAAATCATTGGAGAGTGCCTTGGCCAACCACCTCTCTACCAATTTGAGCAGTTTGAGCCTTCCGAGCAGTACTCTTTTTGATCTTTTCTTGGGTGTGTTGATTGATGATGGTGGAGATGACATCATAGGTGCTGTGAAGGATGATTTGGTAGCTGTTAAAGAGAGGGACCCTGCATGCATTAGTTATGTGCATTGTTTGTTGAATTTCAAAGGGTTTCTTGCATGTCAGGCTCATAGGATTGCTCACAAATTGTGGCTTCAAGGGAGGACGGTTCTGGCTCTGTTGATTCAGAACAGGGTGTCTGAGGTTTTTGCTGTGGATATTCACCCCGGTGCAAAAATTGGACGTGGGATTTTGTTGGATCATGCTACTGGGCTTGTGGTGGGGGAGACTGCAATTATTGGGAATAATGTCTCAATTTTGCATAATGTAACATTGGGAGGGACTGGTAAGGCAAGTGGGGATAGACACCCTAAGATTGGTGATGGGGTGTTGATAGGTGCAGGGACTTGTATTTTGGGAAATATTCAGATTGGTGATGGGGCTAAAATTGGTGCTGGTTCTGTGGTGTTGAAGGATGTTCCACCAAGGACTACTGCAGTTGGCAACCCTGCTAGGTTGGTTGGAGGGAAGGACAATCCTATTAGATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATATATCTCTGAATGGTCTGATTATGTTATCTAG 1176 0.4558 MNVLVLGRFCTSPLYKTSPLTPSSIQFTPIILHPSKLQPLPVIHLFSLSMATCVDAPTPLSRNPRAPQPDDHSFNYIKFCRPTDRVPCIPICKNREMPFARVEELGTRGEGGIAVLEFEPVDLWLKIQEEARLDVDHEPILSSYYFSSILSHKSLESALANHLSTNLSSLSLPSSTLFDLFLGVLIDDGGDDIIGAVKDDLVAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRTVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAIIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIQIGDGAKIGAGSVVLKDVPPRTTAVGNPARLVGGKDNPIRLDKMPSFTMDHTSYISEWSDYVI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01936 391 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 318 346 IPR018357 GO:0016740
Spst6g01936 391 Gene3D Hexapeptide repeat proteins 259 378 - -
Spst6g01936 391 FunFam serine acetyltransferase 1, chloroplastic 112 258 - -
Spst6g01936 391 Gene3D serine acetyltransferase, domain 1 115 258 IPR042122 -
Spst6g01936 391 NCBIfam serine O-acetyltransferase 197 358 IPR005881 GO:0005737|GO:0006535|GO:0009001
Spst6g01936 391 Pfam Bacterial transferase hexapeptide (six repeats) 309 343 IPR001451 -
Spst6g01936 391 SMART SATase_N_2_a 123 229 IPR010493 GO:0005737|GO:0006535|GO:0009001
Spst6g01936 391 Pfam Serine acetyltransferase, N-terminal 123 229 IPR010493 GO:0005737|GO:0006535|GO:0009001
Spst6g01936 391 SUPERFAMILY Trimeric LpxA-like enzymes 123 361 IPR011004 -
Spst6g01936 391 FunFam Serine acetyltransferase 259 384 - -
Spst6g01936 391 PANTHER SERINE ACETYLTRANSFERASE 121 391 - -
Spst6g01936 391 CDD LbH_SAT 256 356 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01936 Spst-Chr6 18812733 18813908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01936 96 381 Miscellaneous Gene Families AT2G17640 50.345 4.84e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01936 K00640 - gmx:606507 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01936 6 18812733 18813908 Spst6g01936 6 18812733 18813908 ECH
Spst6g01936 6 18812733 18813908 Spst8g00967 8 8498343 8499380 PCT