Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00946 ATGCAGACGTCGTCGAAGACCATCTCTGCGGCTCTGAATCTCGTCGACGCCAAGAAAGAGATTTTGAAGAAAGCCTACGACGATCTCCAAACTCATTCTTCTCTCCTCTCTTCCTCCTTCTTCCCTCCCTCATGGTCCCACATCGACGCTCACTTCACCTCCCTCCACAACTCCCTCTCGCAACGCTTTCAGCTTCTTCACTCTCTCGAATCCCAACAACAACACACTCACCCACCTCCCTCTCCCTCCAAAGATCTCACCTTTCCACCCTCCCACTCCGGTCCATCAGCGCTAAACGACGCCGCATTGCCCAAAACCCAGGCCGAACGCATGATTGCGCTCTGCAACTGCATGGACGGAAAAGGGTTGCGGGACTACGTCGGGGAGCATTTCAAAGACAAGGTCACGCTCGAGGTTGGCCTTCAGAGTGCCCTCAAGCGTGCGTCTGATCCCGCGTCGATGGTTCTCGATGCATTGGACGGTGTCGTCGGTGCGGATATGGTGAATGATGATAAGGAAGCGCGAAAGAGGAAGAGGAGTTGCGGGTTGTTGTTTCAGCAGTTGAGGGCTGCGTCTGTGTCTGTGAGTTTTAAGGTGAGTAAAAGAGCGAAGAGGTTGTGTGCGGAGTGGAAGGGGAGCTTGGTGAGTGAAGGTGCTGATGGTGTTGGGGCCATGACTTTCTTGCAGTTTATGGCGGCTTATGGATTGCTTTCTGAATTGACAAAGAATGAGATTGTCACCTTCTCTGCCATGGCTGCTGCCAATGATGACCTTCCTGAATTCTACCGGAGTGTTGGTTTGACAGACAGGGTTCCAGGTCTTGTTCAGAAACTTGTTGACAGGTGCAAACATATTCTGGCTGTCAAGTATGTTTTTGAGTTCAATCTTGCGGATAAGATTCCACCAGTTCCCATCTTGAAAGCTCACGTGAATGAATCTCAGAAACTTGCTAAAAGACTTTCTGAGGAAGGGAAGTCACTTAATGAAATCACAGCAAGAGAAGTCCATGCACTGAGATCGGTGGTTAAGGTTATTGAAAGTCATAATCTTCAATCTGAATATCCACCTGAAAGCCTTCAACAGCGTATAGAGCAATTGTCGAAGCATAAAGCAAACGTAAAATACACTGCATTACCTTTTTCTGCAAAGCCTCCCTCCCATCAGCAGCAACAAAGTGGGATTAAGCGTCCTCGATTGCCTGCCCCAGTTGGTTCTGCAGCTGTGCTGAATGGTATTGGTGGTGCCAGTTCAACAGTTTACCACTTCAAACAACCTCATTTTGAGTCATCAGGTTTGTTGCCAGAGCAACAACCTTATTTCCATTCACCAGGTTTGTTGTTGGAACAACAACCTCATTTCCAGTCATCAGGTTTGTTGCCTGAACAACAACCACATTTCCAGTCATCAGGTTTGTTACCAAAAGATCGAAATCCGTACATGAACTTGCCAACCATGCCATATGGTATGAAGGCTCCAACCCCAACCATCTTGCCTTATACAGGCACTTCAACTGGGCATTATGGTCTTGATGGTGTCCCAATGGGTCCCAGTGGCAACCTTGGTCAAGGTGTGTCTCTTCCAAATTCATCAGAGCCACTTAAGCCGTCTGGTTATTATGAAAGTGTCTCTGCTTATGGTGGTTATGGTCTGCAAACTTTTTACCAAACATCTTATCCTCAGTAG 1683 0.4795 MQTSSKTISAALNLVDAKKEILKKAYDDLQTHSSLLSSSFFPPSWSHIDAHFTSLHNSLSQRFQLLHSLESQQQHTHPPPSPSKDLTFPPSHSGPSALNDAALPKTQAERMIALCNCMDGKGLRDYVGEHFKDKVTLEVGLQSALKRASDPASMVLDALDGVVGADMVNDDKEARKRKRSCGLLFQQLRAASVSVSFKVSKRAKRLCAEWKGSLVSEGADGVGAMTFLQFMAAYGLLSELTKNEIVTFSAMAAANDDLPEFYRSVGLTDRVPGLVQKLVDRCKHILAVKYVFEFNLADKIPPVPILKAHVNESQKLAKRLSEEGKSLNEITAREVHALRSVVKVIESHNLQSEYPPESLQQRIEQLSKHKANVKYTALPFSAKPPSHQQQQSGIKRPRLPAPVGSAAVLNGIGGASSTVYHFKQPHFESSGLLPEQQPYFHSPGLLLEQQPHFQSSGLLPEQQPHFQSSGLLPKDRNPYMNLPTMPYGMKAPTPTILPYTGTSTGHYGLDGVPMGPSGNLGQGVSLPNSSEPLKPSGYYESVSAYGGYGLQTFYQTSYPQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00946 560 MobiDBLite consensus disorder prediction 70 94 - -
Spst8g00946 560 MobiDBLite consensus disorder prediction 512 532 - -
Spst8g00946 560 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 111 391 - -
Spst8g00946 560 MobiDBLite consensus disorder prediction 456 475 - -
Spst8g00946 560 Pfam Frigida-like protein 108 374 IPR012474 -
Spst8g00946 560 MobiDBLite consensus disorder prediction 70 100 - -
Spst8g00946 560 MobiDBLite consensus disorder prediction 456 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00946 Spst-Chr8 8359966 8362372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00946 - - pvu:PHAVU_008G275200g 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01949 6 19043016 19045642 Spst8g00946 8 8359966 8362372 PCT