Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01949 ATGACTACAATGAACACGATCTCAACAGCACTGAACCTTGTAGATTCGAAGAAAGAGAATCTGAAGAAAGCTTTCGATGATCTCCAATCCCTTCTCTCTCCCCTTCCTCTCTCGTGGCCAGACCTGGATTCGCACTTCACCTCGCTCCATAACTCTCTTTCCGACCGCTTCCACCTCCTTCAATCCCAAACCCTAACCCTAACCCCAATTTCCGACCCACCTGCCCAAGCCTGTGCAGAAGCGAACTTTTCATCAAACCCTAACGACCCATCATCGAATCATGACGAATCTTCGCCCAGGGTGTCCCCCCAAAACGACGCCGTTCCGGGCTCGGTTACGCCTAGAAGCGAATTGGTCGTTCTTTGCGAGAAAATGGACAGTGTGGGGTTGAGGAACTACGTCAATGACCACTTTTTGGACAGGGCCAGGGTTCAGGCGGAGCTTCCCGGCGCATTTCACCACGCGCCGGACGCGGGGGTGATGGTTCTGGAAGCGTTGGAGGGGTTTCATGGAGAGGGTAGTGGTAGTGGATTGAAGGAATGCGAACTGAGGAAAATGAGGAAGAGTTGTATTGTGTTGTTGAAGCAATTCAGGGTTGCTGCTCTGAGTGTGAGTGCTGAGGCGAGTGTGAGAGCCATGAAGTTGGCCCAGGAATGGAAAGAGAGGTTGGTGGGTGATGATGACAATGTGTTTGGAGCTTTGGGGCTTTTGCATTTGATTGCTGCATTTGGTCTGGTCTCTGAATTCAGCTTGGACGAGCTTGTGGACTTTTCCGTGGCGGCCCCCACCAATGAGGAGTTCCCAGAGCTGTGCCGGGCGGTCGGGTTGGTGGAGAAAGTTCCCGATATTGTTCAGAAACTTATAGATAAGGACAAACATATTCCAGCTGTCAAGTATATTCTTGAGTTTAATCTTGCTGATAAGATTCCACCTGTTCCTGTTTTGAAAGCTTGTGTGGATGAAGCTAAGCAACTTGCTAAAAAACTTTCGGAGGAAGGAAAGCCATCTAGTGAGAGTACCGCTAGAGAAATTCATACACTGAAATTGGTGATCAAGATTATTGAGAATTATAAGCTTGAATCTGAATATCTACGAGCTAGCCTTGAGCAGCGCATAGAGCAATTAAAGAAGCAGAAGACTAATAATAAACGTCCTGCACCAGCTCCTGCTGCAAAGGCTCAGCATCAACAACAACACAGGAATATGCAGAAGCAGCAGCAAACTGGGATCAAGCATCCTCGATCATCTGCTCCAATTGCTTCTGCAGCTGTCTTCAAGAATGTCAATAATGTCAATTCGGTAATGCACCACTACCAGCAACCCCTTGTCCATCCATCAGGTCCTTCAGCTGGACCTTATGGCCATGATGGTGTCCCAATGGGTCCCAGTGGCAACCCCAATCTAGGTGGTTCTCATCTAAGCTCATCAGCGCCACATGTGCCAACTGGTGGTTATTATGAAAGAACCTCTACTTATGGTGGTACGGGTCTGCAACATTATTACCAAGCATCTCATTATCCTCAATAG 1527 0.4833 MTTMNTISTALNLVDSKKENLKKAFDDLQSLLSPLPLSWPDLDSHFTSLHNSLSDRFHLLQSQTLTLTPISDPPAQACAEANFSSNPNDPSSNHDESSPRVSPQNDAVPGSVTPRSELVVLCEKMDSVGLRNYVNDHFLDRARVQAELPGAFHHAPDAGVMVLEALEGFHGEGSGSGLKECELRKMRKSCIVLLKQFRVAALSVSAEASVRAMKLAQEWKERLVGDDDNVFGALGLLHLIAAFGLVSEFSLDELVDFSVAAPTNEEFPELCRAVGLVEKVPDIVQKLIDKDKHIPAVKYILEFNLADKIPPVPVLKACVDEAKQLAKKLSEEGKPSSESTAREIHTLKLVIKIIENYKLESEYLRASLEQRIEQLKKQKTNNKRPAPAPAAKAQHQQQHRNMQKQQQTGIKHPRSSAPIASAAVFKNVNNVNSVMHHYQQPLVHPSGPSAGPYGHDGVPMGPSGNPNLGGSHLSSSAPHVPTGGYYERTSTYGGTGLQHYYQASHYPQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01949 508 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 111 401 - -
Spst6g01949 508 Pfam Frigida-like protein 112 385 IPR012474 -
Spst6g01949 508 MobiDBLite consensus disorder prediction 78 111 - -
Spst6g01949 508 MobiDBLite consensus disorder prediction 445 486 - -
Spst6g01949 508 MobiDBLite consensus disorder prediction 378 417 - -
Spst6g01949 508 MobiDBLite consensus disorder prediction 70 112 - -
Spst6g01949 508 Coils Coil 358 378 - -
Spst6g01949 508 MobiDBLite consensus disorder prediction 394 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01949 Spst-Chr6 19043016 19045642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01949 - - gmx:100818664 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01949 6 19043016 19045642 Spst6g01949 6 19043016 19045642 ECH
Spst6g01949 6 19043016 19045642 Spst8g00946 8 8359966 8362372 PCT