Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00942 ATGGAATCCCCACAATCTGTTGTGTCACCATTCAAGAGCTCTGTCTTAGGTGAAGCTGGGAAGTATAAGTCTGATATTTGCACGCAAAGCTCGGGTCCTTTGTCTAAGGACATTGAAGTCAATGGAAAGGAAGCTGTCATGTCCAATTCAGAGGACTTCATTGGTGTTGTTGATGTTTACATTCATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAAATTAGCTTGACTAGTAATCCTGAGAATACCGTCTCTACCAAAACTATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGAGAATCTTCGTATAAGCGTTAGGACTGTTGATTCTGCTGTCAAATGTGAAATTTGGATGCTGAGCAGGGTCAAGAATTATCTTGAAGATCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCAGAAGTACTGGTGAAGGATGGCAAGCTAGAGAAAGAGTTCTCCCTTTCCTCAACTGATCTATTCCATTCACCAGCCGGTTTTGTGCAATTGTCTCTCTCATACAACGGCGCTTCACCTGATGTTATTGCAATTTCTGCAATGCCTACTGAGTTGGCTGCAAATGGCACCGAGTCATGCGAAACACTGGTCAGAGATTTAGACAAAATTGAATTCCCGGATCCAAAAATCGTAAATGAAGACCACCTGATGGTTTCAGAATACTTTGGCATTCCATGTGAGGAGAGCCAGTGTTCTGGTAGCTTGACCACTACTGATGCTGAAAATCTGAGTTCTGAAGCAGGCGTTCAGCTTGTGGAGAGCTTTTCAGCATGCAGCGTTGGGTCTGCCCAACCTCCTAAGGTTGATTCCCCACCTACCAGTGTATCCACAAATGGAGTTTCATCTCCTTCAGTGGTTGCAAGCACAGATTCATCTGATGTTGCTGCTTCCAAGTCTCCGAATCAGGAACAAGTTTCGGTCACCAAAGAGAAAAATGGGGATGTCAAAGATGGTGAGACCGATTCCTCAAATGGGGTGCTGAATGAATCATTCCCTAAGCCTGTTGTGACCGTGAACATCGAGCCTGAGTCAAATGTGGTGCAGCAGGACATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACAGAGTCGTTGGCAAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCTGAACAGAAGTTACAGACACCAAAGAGCGCTAACTCCCGTGTGTTTTATGGCAGCAGGGCTTTCTTCTGA 1272 0.4434 MESPQSVVSPFKSSVLGEAGKYKSDICTQSSGPLSKDIEVNGKEAVMSNSEDFIGVVDVYIHQARDIHNICIYHKQDVYAKISLTSNPENTVSTKTINGGGRNPVFNENLRISVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKDGKLEKEFSLSSTDLFHSPAGFVQLSLSYNGASPDVIAISAMPTELAANGTESCETLVRDLDKIEFPDPKIVNEDHLMVSEYFGIPCEESQCSGSLTTTDAENLSSEAGVQLVESFSACSVGSAQPPKVDSPPTSVSTNGVSSPSVVASTDSSDVAASKSPNQEQVSVTKEKNGDVKDGETDSSNGVLNESFPKPVVTVNIEPESNVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKLQTPKSANSRVFYGSRAFF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00942 423 MobiDBLite consensus disorder prediction 274 322 - -
Spst8g00942 423 MobiDBLite consensus disorder prediction 387 412 - -
Spst8g00942 423 PANTHER EXPRESSED PROTEIN 1 423 - -
Spst8g00942 423 MobiDBLite consensus disorder prediction 391 412 - -
Spst8g00942 423 SMART C2_3c 56 159 IPR000008 -
Spst8g00942 423 Gene3D C2 domain 51 191 IPR035892 -
Spst8g00942 423 CDD C2 57 163 - -
Spst8g00942 423 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 184 IPR035892 -
Spst8g00942 423 Pfam C2 domain 56 161 IPR000008 -
Spst8g00942 423 MobiDBLite consensus disorder prediction 274 344 - -
Spst8g00942 423 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00942 Spst-Chr8 8334153 8335424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00942 - - gmx:100781587 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00942 8 8334153 8335424 Spst8g00942 8 8334153 8335424 ECH
Spst6g01954 6 19114082 19115368 Spst8g00942 8 8334153 8335424 PCT