Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00937 ATGGAGAAGTGGTGGGAGGGAACAAATGAAATGGTTGGATTGTATTGGAGAAGTGGGAGCAGTCTCACTCACTCACCAAGAATCGAACACCACCATCAAATCAAAACGCAGTCGCAATTCACGGTCGCACGTTGTCCTTCCACGGTGGACACCCACTCACTCATGCACAACATCGCAGTTTTGCGCGTTTCCTCACATCACCTCACGCCACCAATCAACCTCCGCCACGTTGCCGGGATGTGGAATCCACGCGCTCTCTCTGCTCCACTCGCCGTGCTTCTTCTTCACTCTCTCCTTGCTCTCGTCTCTGCTCAGAGATCTGCTTGGAACACGCTCGACGGATCTGTGCGAGGTCCACCGTTGGTTGTGGCACGTGGTGGATTTTCAGGGATATTTCCTGATTCTAGTGATGGTGCCTATAATTTGGCGGTAATAACGTGTGGACCGGATGTCTATATATGGTGTGATGTGCAGTTAACAAAAGATGGAGTTGGGATTTGCCAACCAGAGTTAAATCTTGCAAACTCTACCGACATTTCAGCCACTTACCCAAATAAAACCAAAACCTACATGGTTAATGGAGCACCCATCAGTGGCTATTTTTCTCTGGATTACACTATGAAGGAGCTAGGCAATCAAATATTAACTCAGGGAGTACTCTCTCGATCCAGCCGGTTTGATGGCAATGCTTTTCAAATCCTTACTGTTGATGATTTGGTTACATTGAACCAAAAACCAAAAGGAATATGGTTGAATATTCAGCACAATGCATTCTACGCACAGCACAATTTGAGTATGAGAAACTTTGTGCTTTCAGCTGCTAGAAGAATAGTTTTCAGTTATATCTCTTCACCCGAGGTTGATTTTCTGAGAGGTATATCAACACGCTTCAACCCAAAAACAACAAAACTGGTCCTCAGGTTTATGAGTCAGGATGACGTAGAACCATCAACCAATCAGACTTACGGTTCGCTTTTAAAGAATCTTACATTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCAAAGGGATACATATGGCCTGTAGATGCAACTCTTTATCTACAACCACATACATCTTTGGTCTCGGATGCACATAAAGCGGGGCTGGAAGTTTTTGCGTCAGATTTTGTGAATGATGTTCCATTTAGCTTCAATTACAGTTTTGATCCACTTGCCGAGTACCTCCAGTTCGTAGACAACGGTGAATTCTCTGTTGATGGTGTGCTGTCTGATTTCCCCATTACTCCATTTGAAGCTATAGCTTATGGAGAAGTTTCTCCTAACAGACTCGTAGTTTTTGTCCTCGTTCCATGGAATGGAGTTGTTAGAGCTGTAAGGAGTTACGTGCACACTTTGCATGAGGATGCCACTAATGCTGGTGGGATTTATGTTGACTTTGACCAGAGGATTTCATGCTCGAATCCTCCTTGGGCGGCCCTTTATGCTGATCAGATTCAGATAGGGTCCAGATGTTGCTTTTCTCACGTTGGCACCAATGCTACAGAACAAGATAAAATTTTGATCATCTCAAAATATGGAGCTAGTGGAGATTATCCTGCTTGTACCGATTTAGCATATAATAAGGCCATAGCTGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCAAAAGATGGAACACCATTTTGCTTAAACTCCATTGATCTCATAGAGAGTACAACAGTTACCCAATCAAAATTCAGTAATTTGGCCATTATTATCCCCGAGATCAAATCTGTCAGTGGTATATATGCATTCAACCTGACGTGGAATGATATAAAAAACTTGACCTGTAAGTCAGAGAAAGTTCTGAACCCAAAATTTAAGAATGCTGGGAATTTGTTGACGCTATCAGATTTCTTGTCCTTGGCAAAAAATCAGACTTCTCTATCTGGTGTCTCTATCATTGTTGAGAATGCAGCCTATCTTGCTGAAAAACAAGGATTAAGTGTGATTGATGCAGTCATCAATGCTTTGAGCAAGGCAGGTTATGATAAAGGAGGATCCCAAAAGGTTTATATTCAGTCCACTAATAGCTCTGTACTGCTAAAGTTCAAAGAGAAAACCAGTTATAAACTTGTGTACAAGATTGACGAGACTGTCGGTGATGCTGCTAATGCAGCTGTTGAGGATATAAAGAACTTTGCTAGTGCTGTGGTTGTCAGCAAGGACTCCGTATTTGCTAGTAATAGTAAATTCTTGATTTACAATACGAAGACTGCGCCAACGCTAAACGCTGCTAACCTCTCAGTTTTTGTAGAAACATTCAGCAATGAGTTTGTTTCTCAAGCATGGGATTTCTTCTCAGATGCAACCATTGAGATAAACTCATATGTGAATGCTGATGGAGTAAAAATTGATGGTATCATCACAGACTTCCCTAAAACTGCTGACAGATACAGAAGGAACAAATGCTTAAATTTGGGTGCCAACAAACCTGTTTACATGGATCCTGTTCAACCAGGTGGTCTGTATGGACTAATTACCTCAGGTTACTTGCCTCCGGCTGAAGCTCCACTCCCACCCTTAACAGAATCTGAAGTTGCAGAGCCACCTTTGCCTTCTGTTGCTAAACTAGCCCCAGCCCCAGCTTCCGGTCCCAGTGCTGGAACCAAAGCACCACCCGGAAATGCACAGCCTAAGACTGCTGTCTGCTTCTTCTTTTCCACTCTGGCTGTGTTCATAGCTTCCCTTCTTCTGCTTTGA 2712 0.4299 MEKWWEGTNEMVGLYWRSGSSLTHSPRIEHHHQIKTQSQFTVARCPSTVDTHSLMHNIAVLRVSSHHLTPPINLRHVAGMWNPRALSAPLAVLLLHSLLALVSAQRSAWNTLDGSVRGPPLVVARGGFSGIFPDSSDGAYNLAVITCGPDVYIWCDVQLTKDGVGICQPELNLANSTDISATYPNKTKTYMVNGAPISGYFSLDYTMKELGNQILTQGVLSRSSRFDGNAFQILTVDDLVTLNQKPKGIWLNIQHNAFYAQHNLSMRNFVLSAARRIVFSYISSPEVDFLRGISTRFNPKTTKLVLRFMSQDDVEPSTNQTYGSLLKNLTFIKTFASGILVPKGYIWPVDATLYLQPHTSLVSDAHKAGLEVFASDFVNDVPFSFNYSFDPLAEYLQFVDNGEFSVDGVLSDFPITPFEAIAYGEVSPNRLVVFVLVPWNGVVRAVRSYVHTLHEDATNAGGIYVDFDQRISCSNPPWAALYADQIQIGSRCCFSHVGTNATEQDKILIISKYGASGDYPACTDLAYNKAIADGVDVLDCPVQMSKDGTPFCLNSIDLIESTTVTQSKFSNLAIIIPEIKSVSGIYAFNLTWNDIKNLTCKSEKVLNPKFKNAGNLLTLSDFLSLAKNQTSLSGVSIIVENAAYLAEKQGLSVIDAVINALSKAGYDKGGSQKVYIQSTNSSVLLKFKEKTSYKLVYKIDETVGDAANAAVEDIKNFASAVVVSKDSVFASNSKFLIYNTKTAPTLNAANLSVFVETFSNEFVSQAWDFFSDATIEINSYVNADGVKIDGIITDFPKTADRYRRNKCLNLGANKPVYMDPVQPGGLYGLITSGYLPPAEAPLPPLTESEVAEPPLPSVAKLAPAPASGPSAGTKAPPGNAQPKTAVCFFFSTLAVFIASLLLL 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00937 903 ProSiteProfiles GP-PDE domain profile. 120 421 IPR030395 GO:0006629|GO:0008081
Spst8g00937 903 ProSiteProfiles GP-PDE domain profile. 507 803 IPR030395 GO:0006629|GO:0008081
Spst8g00937 903 SUPERFAMILY PLC-like phosphodiesterases 119 418 IPR017946 GO:0006629|GO:0008081
Spst8g00937 903 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 92 422 - -
Spst8g00937 903 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 118 420 - -
Spst8g00937 903 Pfam Glycerophosphoryl diester phosphodiesterase family 130 415 IPR030395 GO:0006629|GO:0008081
Spst8g00937 903 Pfam Glycerophosphoryl diester phosphodiesterase family 514 798 IPR030395 GO:0006629|GO:0008081
Spst8g00937 903 SUPERFAMILY PLC-like phosphodiesterases 506 803 IPR017946 GO:0006629|GO:0008081
Spst8g00937 903 CDD GDPD_SHV3_repeat_2 507 802 - -
Spst8g00937 903 Gene3D Phosphatidylinositol (PI) phosphodiesterase 119 420 IPR017946 GO:0006629|GO:0008081
Spst8g00937 903 Gene3D Phosphatidylinositol (PI) phosphodiesterase 506 802 IPR017946 GO:0006629|GO:0008081
Spst8g00937 903 CDD GDPD_SHV3_repeat_1 120 420 - -
Spst8g00937 903 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 505 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00937 Spst-Chr8 8293461 8299703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00937 109 895 Receptor kinase-like Gene Family AT5G58050 36.717 1.36e-149 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00937 - - qsa:O6P43_021244 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00937 8 8293461 8299703 Spst8g00937 8 8293461 8299703 ECH
Spst6g01966 6 19202546 19218838 Spst8g00937 8 8293461 8299703 PCT