Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01966 ATGTGGAACTCACGCTCTCTTCTCGGTTCACTCTCTCTTACGTATTCTCTTCTTCTTCTTCTTCGTTTGGTGCTGCCTCTGGTCTCTGCACAAGGATCCAACAGCACCACTTGGAACACTCTCTCCGGAAGTCCACCATTGGTTGTAGCACGTGGTGGGTTTTCTGGGATATTTCCCGATTCCAGTGATTCTGCATATGATTTGGCAGCACAAACTAGTTTAGCAAATGTCATTGAATGGTGTGATGTGCAATTAACGAAAGATAGGGAGGGAATCTGCATCCCAAACATCAAACTTGAAAATGCTACTGACATTAGTGGCATTTCTGAATATACAAGCAAGACTTACTCAGTTAATGGTGAGCAAACCAGTGGCTATTTTTCTGTGGACTACACCCTAAAGGAGCTTTCCAATGTCTTTTTGATTCAGGGAGACTATACTCGATCAAACAAGTTTGATAACAGTCATTGTCAAATTCTTACTGTGAAAGATTTGGTTAAGAGAGGAAAAACCCAACCAGGATTGTGGTTGAATATTCAGCATGATGCATTCTATGCACAACACAATTTGAGTATGAAAAATTTTGTACTTTCTGTTTCTAAAACAGTAAATGTCAATTATATCTCATCACCTGAAGCTGGTTTCCTGAGAAGTTTAAGAGCACACATCAACCCAAGAATAACAAAACTGGTCTTCAGGTTTATGGAAAAGGATAATGTAGATCCATCAACTAATCAGACTTTTGGTTCACTGTTAAAAAATCTAACATCTATCAAGACATTTGCTTCAGGAATACTTGTTCCCAAAGGATACATATGGCCTGTAGATCCAACGAGTCTTTATCTTCTACCACATACATCTTTGGTCTCTGATGTGCACAAGGTGGGGCTGGAAGTCTTTGCCTCAGATTTTATGAACGATGTCTCAATCAGCTATAATTACAGTCATGACCCTGTTGCTGAGTACCTCAATTTCATTGACAATGGAAACTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCCCTAACATCATCTGAAGCTATAGACTGCTTTGCTCACGTAGGCCTCAATGTTCCAAAAAAAGTTAACACTTTGGTCATTTCAAAATATGGAGCAAGTGGGGACTATCCTCCTTGTACCGACTTGGCATATGATAAGGCTGTTTCAGATGGTGTGGACGTTCTTGACTGTCCTGTTCAAATGTCCAAGGATGGAATACCATTTTGCTTAAGCTCTATTGATCTTTTAGAGAGCACAAATGTTGCTCAATCAAGTTTCAACAAACTTGGCAAAACTATCCCGGAGATCAAATCTGACAAGGGAATATTTACATTCGACCTGGCATGGGATGATATAAAAAGCTTGAGCCCCTTAATGTTGAACCCGTATTCTAATAACAATTTGTATAGGGACCCAAAATATAACAAGAAGGGGCAATTTTTAACATTGTCAGATTTCTTGAACATGACAAAAGGTCACTCTTCCACTCTAAGTGTTATGATCATCATTGAGAATGCAGCCTATCTTGCAAGGAAACAAAACTTAAGTGTGACTGATGCGGTCATTGATAGTTTGAGCAAAGCAGGTTATGATAAACCAGGGGCTCCAAAAGTTATGATTCAATCCACTAATAGTTCTGTGCTATTGAAATTCAAGGAGAGAGCAAAGTATGAGCTTGTCTACAAGATTGATGAGATAGTCGGTGGTGCTGTTGATTCAGCTATTTCGAATATCAAAAGATTTGCTCATTCTGTGGTTGTCAAAAAAGCATCTGTATATCCTGTTAGTCAAGCATTCGTGATTGGCTCTACAAAGATTGTGTCAAAGTTCAAATCTTCTAATCTTTCTGTTTACGTGGAAACATTCAGCAATGAGTTTGTATCTCAGGCATGGGATTTCATGTCAGATGCTTATGTCGAGATCAACACATTCGTTCAGGATGTTGAAATTGATGGTGTCATCACAGACTTTCCGAAAACAGCTAATAGATACAGAAGGAACAGATGCTTAAATTTGGGTGACAGCACACCTTCTTACATGGAACCAGTTGCAGTAAGTAGCCTTTTGCAAGCCATGGACGAATCTTTCTTGCCACCAGCTATGGCTCCAGCCCCTCCCCTGACTGAAGATGAAGTGACAGAACCCCCTTTGCCTCCTCTTTCTAAAATTGCCCCATCTAGCCCTATTAATGGGACTGAACCAGGAGCACAACCACCGCGAAATACACAGGCTAGGGTCTCTGTCTGCTTCTTTTTGTACACTCTCACTGTGCTTGTAGCTTTGCTTCTGCTTTGA 2295 0.4035 MWNSRSLLGSLSLTYSLLLLLRLVLPLVSAQGSNSTTWNTLSGSPPLVVARGGFSGIFPDSSDSAYDLAAQTSLANVIEWCDVQLTKDREGICIPNIKLENATDISGISEYTSKTYSVNGEQTSGYFSVDYTLKELSNVFLIQGDYTRSNKFDNSHCQILTVKDLVKRGKTQPGLWLNIQHDAFYAQHNLSMKNFVLSVSKTVNVNYISSPEAGFLRSLRAHINPRITKLVFRFMEKDNVDPSTNQTFGSLLKNLTSIKTFASGILVPKGYIWPVDPTSLYLLPHTSLVSDVHKVGLEVFASDFMNDVSISYNYSHDPVAEYLNFIDNGNFSVDGVLSDFPLTSSEAIDCFAHVGLNVPKKVNTLVISKYGASGDYPPCTDLAYDKAVSDGVDVLDCPVQMSKDGIPFCLSSIDLLESTNVAQSSFNKLGKTIPEIKSDKGIFTFDLAWDDIKSLSPLMLNPYSNNNLYRDPKYNKKGQFLTLSDFLNMTKGHSSTLSVMIIIENAAYLARKQNLSVTDAVIDSLSKAGYDKPGAPKVMIQSTNSSVLLKFKERAKYELVYKIDEIVGGAVDSAISNIKRFAHSVVVKKASVYPVSQAFVIGSTKIVSKFKSSNLSVYVETFSNEFVSQAWDFMSDAYVEINTFVQDVEIDGVITDFPKTANRYRRNRCLNLGDSTPSYMEPVAVSSLLQAMDESFLPPAMAPAPPLTEDEVTEPPLPPLSKIAPSSPINGTEPGAQPPRNTQARVSVCFFLYTLTVLVALLLL 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01966 764 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 17 759 - -
Spst6g01966 764 ProSiteProfiles GP-PDE domain profile. 364 665 IPR030395 GO:0006629|GO:0008081
Spst6g01966 764 MobiDBLite consensus disorder prediction 700 723 - -
Spst6g01966 764 Pfam Glycerophosphoryl diester phosphodiesterase family 53 342 IPR030395 GO:0006629|GO:0008081
Spst6g01966 764 Pfam Glycerophosphoryl diester phosphodiesterase family 371 660 IPR030395 GO:0006629|GO:0008081
Spst6g01966 764 MobiDBLite consensus disorder prediction 700 740 - -
Spst6g01966 764 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 44 347 - -
Spst6g01966 764 ProSiteProfiles GP-PDE domain profile. 46 348 IPR030395 GO:0006629|GO:0008081
Spst6g01966 764 SUPERFAMILY PLC-like phosphodiesterases 45 347 IPR017946 GO:0006629|GO:0008081
Spst6g01966 764 MobiDBLite consensus disorder prediction 725 740 - -
Spst6g01966 764 SUPERFAMILY PLC-like phosphodiesterases 364 665 IPR017946 GO:0006629|GO:0008081
Spst6g01966 764 CDD GDPD_SHV3_repeat_2 365 664 - -
Spst6g01966 764 Gene3D Phosphatidylinositol (PI) phosphodiesterase 45 348 IPR017946 GO:0006629|GO:0008081
Spst6g01966 764 Gene3D Phosphatidylinositol (PI) phosphodiesterase 363 664 IPR017946 GO:0006629|GO:0008081
Spst6g01966 764 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 362 665 - -
Spst6g01966 764 CDD GDPD_SHV3_repeat_1 46 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01966 Spst-Chr6 19202546 19218838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01966 5 764 Receptor kinase-like Gene Family AT4G26690 50.723 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01966 - - gmx:100814941 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01966 6 19202546 19218838 Spst8g00937 8 8293461 8299703 PCT