Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00927 ATGGCTCCCATGGGAGACAATGTTGTTGTGTCCAACATGGAACTCGAGAGGTTGCTCAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCGAGGTCGATGCTTCACCTTCTGAGAGAGACTCTAGACAGAGTTGAGCTTGTTGAGGGACGTGAGGTACCGTTTGTGGTGGTGGACTTGGGGTGTTCGTGTGGGAGCAACACCATAAACGTGGTGGATGTGATGATAAAGCACGTCATGAAACGGTACGAGGTATTGGGGTGGCAGCCACCAGAGTTCTCAGCTTTCTTCTCAGACCTTCCCAGCAATGACTTCAACACACTCTTTCAGCTCCTTCCTCCGCTCGCCAACTATGGCGTCAGCATGGAAGAATGCCTTGCCGCCAACAACCACCGCTCCTACTTCGCCGCCGGTGTCCCCGGTTCTTTCTACCGGAGGCTTTTTCCGGCCAGGTCTGTGGATGTTTTCCACTCAGCCTTCTCTTTGCACTGGCTTTCTCAGGTGCCAGAAAGTGTAGTGGAAAAGAGGTCAAGTGCATACAACAAAGGAAGGGTGTTTATCCATGGTGCTGATGAGAGCACAGCAAATGCTTACAAGAAACAATTCCAAACAGACTTGGCAGGCTTTCTGAAGGCAAGGTCAGTGGAGATGAAGAGAGAGGGGTCCATGTTCTTAGTTTGCTTGGCCAGAACTTCAGTGGACCCCACAGACCAAGGTGGGGCAGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGACTGCTTAGTCAAGAAAAACGAGACAGTTTTAACATTCCAGTTTATGCAGCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCAAATGGTTCATTTTCCATAGACAAGCTTGAGGTATTCAAAGGAGGAAGTCCACTTGTGGTGAACCAACCAGATGATGCAAGTGAAGTAGGCAGAGCTCTAGCCAACAGCTGCAGGACTGTGTGTGGAGTCCTTGTTGATGCCCACATAGGTGACAAACTAAGCGAGGAACTTTTTCTTAGAGTGGAACGTAGAGCTACTACCCATGCCAAAGAGCTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCAATGA 1164 0.4931 MAPMGDNVVVSNMELERLLSMKGGKGEASYANNSQAQAIHARSMLHLLRETLDRVELVEGREVPFVVVDLGCSCGSNTINVVDVMIKHVMKRYEVLGWQPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPESVVEKRSSAYNKGRVFIHGADESTANAYKKQFQTDLAGFLKARSVEMKREGSMFLVCLARTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLLSQEKRDSFNIPVYAASLQDFKEVVEANGSFSIDKLEVFKGGSPLVVNQPDDASEVGRALANSCRTVCGVLVDAHIGDKLSEELFLRVERRATTHAKELLEQLQFFHIVASLSFAQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00927 387 Gene3D - 19 368 IPR042086 -
Spst8g00927 387 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 20 367 IPR005299 GO:0008168
Spst8g00927 387 Pfam SAM dependent carboxyl methyltransferase 63 383 IPR005299 GO:0008168
Spst8g00927 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 384 IPR029063 -
Spst8g00927 387 Gene3D Vaccinia Virus protein VP39 33 313 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00927 Spst-Chr8 8210856 8214624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00927 K18848 - gmx:100807953 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00927 8 8210856 8214624 Spst8g00927 8 8210856 8214624 ECH
Spst6g01988 6 19609194 19612767 Spst8g00927 8 8210856 8214624 PCT