Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01988 ATGGGAGACAATGTTGTAGTGTCCAACATGGAGCTTGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAGGGAAGTTATGCCAACAATTCCCAAGCTCAGGCCATACATGCCAAGTCCATGCATCACCTTCTCAAAGAAGCCCTAGATGGAGTTCAACTTCAAGACCCTAACATACCATTTGTGGTTGTGGATTTGGGGTGTTCATGTGGAAGCAACACCATCAATGTGGTGGATGTGATCATCAAGCACATCATCAAACGCTACGATGCCTTGGGATTAGACCCTCCTGAGTTTTCAGCCTTCTTCTCAGACCTTCCTAGCAATGACTTCAACACCCTCTTCCAGCTCCTTCCTCCCTTAGCCAACTATGGAGTTAGCATGGAGGAGTGCCTTGCCGCTAACAACCACCGCGCCTACTTCGCCGCCGGCGTCCCTGGCTCCTTCTACCGGAGACTTTTTCCGGCAAGGTTCATTGATGTTTTCCACTCAGCCTTTTCCTTGCATTGGTTATCTCAGGTACCAGAATCTGTCATGGACAAGAGGTCAAGTGCATACAACAAGGGGAGGGTGTTCATCCATGGTGCTAGTGAGATCACAGCAAATGCTTACAGAAAACAATTCCAAGCAGACTTGGCAGGGTTCTTGAGCTCAAGATCTTTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCTGTGGACCCCACAGACCAGGGTGGTGCTGGTCTCCTATTTGGCACCCACTTTCAGGATGCTTGGGATGATCTTGTGCAAGAGGGATTGATTAGCAGTGAGAAAAGAGACAGTTTCAACATTCCAGTTTATGCACCAAGTTTGCAAGACTTCAAGGAGGTGGTTGAAGCTGATGGTTCATTTGCCATAAACAAGCTTGAGGTGTTCAAAGGGGGAAGCCCTCTTGTGGTGAACCAGCCAGGTGATGCTAGTGAAGTAGGAAAGGCCCTTGCCAACACCTGCAGGAGTGTGTCCGGTGTCCTTGTTGATGCTCACATTGGTGAAAAGCTTAGTGAGGAACTGTTTCTGAGAGTGGAACGTAGAGCCACAAGTCATGGCAAAGAGTTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCTATGA 1152 0.48 MGDNVVVSNMELERLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDGVQLQDPNIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYDALGLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRAYFAAGVPGSFYRRLFPARFIDVFHSAFSLHWLSQVPESVMDKRSSAYNKGRVFIHGASEITANAYRKQFQADLAGFLSSRSLELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISSEKRDSFNIPVYAPSLQDFKEVVEADGSFAINKLEVFKGGSPLVVNQPGDASEVGKALANTCRSVSGVLVDAHIGEKLSEELFLRVERRATSHGKELLEQLQFFHIVASLSFAL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01988 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Spst6g01988 383 Gene3D - 16 362 IPR042086 -
Spst6g01988 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 361 IPR005299 GO:0008168
Spst6g01988 383 Pfam SAM dependent carboxyl methyltransferase 59 379 IPR005299 GO:0008168
Spst6g01988 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01988 Spst-Chr6 19609194 19612767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01988 K18848 - gmx:100801476 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01988 6 19609194 19612767 Spst6g01988 6 19609194 19612767 ECH
Spst6g01988 6 19609194 19612767 Spst8g00927 8 8210856 8214624 PCT