Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00891 ATGTGTGGCAACGGAAGTAAGCACATGGAAGAAGGTCTGAAATTTGTCTATATCGACCATGAAAGTTCGAGGTCAACCTACCTTTACTTCATCTTCAATGTTCTCATCATTGCACTTGGAGCTGAACCTGGTCTTCTATCAATTGTTTCTAAGCCTTTAGAAGACAGAAAGCAACATGTTTCTGTCACCCAGAAACTTGTAATGCCCCCAGAAGTGTATGAACCTGACGAGGAAAGGGTGGAAGGATTCTTCATAACAGGTGGAAGTGGTGCTCCGGATCACAGTGAAGGGAAGGCTAAGGTTATTGAAATGTTTGCTTCGGATGAGAAGATTGCTGGTGTCACTGAAGTGGATGAGGAGATTGAAGCAGGTGAGGGTGGGGGAGTTAATGGGCAAGAGTTGTTTGCCAAAGCTGAGGCCTTCATTGGGAACTTCTACAGGCAGTTAAAGATGCAGAGAGAAGCTTATCAGGAAACCTTTTAG 483 0.4451 MCGNGSKHMEEGLKFVYIDHESSRSTYLYFIFNVLIIALGAEPGLLSIVSKPLEDRKQHVSVTQKLVMPPEVYEPDEERVEGFFITGGSGAPDHSEGKAKVIEMFASDEKIAGVTEVDEEIEAGEGGGVNGQELFAKAEAFIGNFYRQLKMQREAYQETF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00891 160 PANTHER OS01G0532300 PROTEIN 22 118 - -
Spst8g00891 160 Pfam Cotton fibre expressed protein 132 156 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00891 Spst-Chr8 7867389 7873308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00891 - - vra:106764543 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02005 6 19877032 19877592 Spst8g00891 8 7867389 7873308 PCT