Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02005 ATGAACAAGTTTAAGAAATCTCAAGTTCTAGTGCTGCTTGTTCTAGTTGTTCTTCTTGTCATCACACCTTCTTTACCTTCCTCTCTGAGGCCAACCTACTTGTATTTCATCATAAACTTTCTCATCATGGCACTCTGTGCTGAAGCTGGACTCCTTTCAGTTTTTTCTAGGCCTTTAGAAGATAAAAAGCAACCTGCTTCTGTTACCACTAAACCTGTGATGCCAGCAGAAGCCACTTTTGAGAAAAGTGAAGGTTCAAATTCCACCCCTACAGTTGTTGGTGCTGTCTTAGAACATGCTGAAAAGTCTGCATCTGAGAGGGTTGTTTGTGTCACCAAAGTGGACATGGTGCAAAATTGTCCTTCAAAGCCTAGCCTATTCGTCATAGGGAGTGGAGAAGCTGATGAAGAAGTCATGGATGAAGAACTTGAAGCAGAAGAGGAGTTTGGAGGAGTTAATGGGCAAGAGCTGTCTGCAAAAGCTGAGGCCTTCATTGGAAACTTCTACAAGCAACTGAAGATGCAAAGTGAGGAATCATGGATTTATCAAAAAGCCTTTTAG 561 0.4207 MNKFKKSQVLVLLVLVVLLVITPSLPSSLRPTYLYFIINFLIMALCAEAGLLSVFSRPLEDKKQPASVTTKPVMPAEATFEKSEGSNSTPTVVGAVLEHAEKSASERVVCVTKVDMVQNCPSKPSLFVIGSGEADEEVMDEELEAEEEFGGVNGQELSAKAEAFIGNFYKQLKMQSEESWIYQKAF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02005 186 PANTHER OS01G0532300 PROTEIN 1 185 - -
Spst6g02005 186 Pfam Cotton fibre expressed protein 155 180 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02005 Spst-Chr6 19877032 19877592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02005 - - ccaj:109811312 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02005 6 19877032 19877592 Spst6g02005 6 19877032 19877592 ECH
Spst6g02005 6 19877032 19877592 Spst8g00891 8 7867389 7873308 PCT