Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00885 ATGGAGGAGCAGACTTTCGTGTCGAGAGCGCGGATCGCCTTTCATTCTGCGGCGGCTAAAGCGGAGCGCGTGCTCATGGATTTCAAATCCGATCGAGAAGATCACAATAAGCCATTGTCGCCGGAAGCTGATTCTCCCAAAAACAACGGAAACGAGTCCAAGATTCGCAGTGAATTGAAGCATATAAAGTGGAGGCCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAGAATAAAGAGCATACGGAGAGGGAGAAAAGAAGTTGAAGATACAGATAAAGCTGGGGATGCAAACATGGCAATTCCATTTTATGATGATAATTTGTACACCCTGAATGTGAAGAATGATCTTGATGCCAAGGCTTCAGAATTATATCCTTCAGTTGAAAGCCTAACTGCTGCAACTAAAGATCCCATTCCTCCGTCATCTGTACTCAAGCAATTGGCTGTAGCTGTTGAGTTCTATTCAATGTCGTTGCATTCTGTCTATCTGGCTGCAAAATTCTCCTTCTCTATCTGGCTCATATTTGTTGAATTCATGGCTGGAAGTAAAGTGAAGTCAATTAAAGATTTTATAGCCTCATCAGGAGGTTCTTCACCTGCTAAAGAGAGGGCAGGCTTGAGTCTCTCTTCTGTGAAGGCTTTAGTGCTACGTGACAAGGACAAACTTACTTCTGAGTTTACTAGCAATGAGAAAGTTGTTCAGTTAATCAATTCTCTGTTTGATCCAGAGGGAGATTTTCTTAGAAGAAAGATAAACTCTAATATAGAGGAAACTGCCATGACATCTTTGCCAAGAGATATTCATGGTGCTCCTGCTGAAAGCCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAAAACTGTCCGTAAAATGGCTCTTTTCTGGTGCAGGGTTGTTGCTGAACTAAGAAAACTTTGGTCTGAGGAGCAACACATACCGGGAGTCCCACAGAATGAGATTCCTGATTTGAAGTCATGTCTTCTCTATCAACATTTTCAAGTAATCAATTGCTGCATCTCTCGGAAAAGGTTCCGTTTTATTGCCACTGAATCTCTAGACTCTATGATGATGCAAGCTAGTTCAGACACAAAAGAATCATCTGATTATAATGCTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTAAATACTGGGGAGCTTGTTCTACGACTTGGTGCAGATCGTCTTGCTGGAGATATAACATTGTTGGAAACTGGCGAGCCTGTCTATTCTCCAGTCACCCAGGAAGGGCCTTTGCTTACAGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGTTCTCAATTGCTCTCGGATATGCAAGCTTTCAAGGCCGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGACAATGAGGCAAGTGCCGAGGATAGCGATGTTTTTGATAGTAGTGAGTTATTGTCTGCCAAAGGTCAGCTCAGTCGGCGTATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCAAAACCAGTACCTGCTGTCAAGCAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTAAATGCATTTGAGGACATCCATCCTCCTGATCTTTTTGGACAGCTGTTTGTTTCTTTACTTGGTTTAGGGTTGGCAATTGCTGAACCTATGCTGTCTAGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACGTAGTTGCCGCTTGTCAAAGCAACAAAATGAATGAGAAAGTTGATGATCTTGTCCAGGCATACGAAACAGTGGAGAGAATGTTATTGAATCCTGAAGAAGCATTAAAGATGATTAAGCAGACTGAGGAATCAACCATGGTTACTGATGAAGCAAAGAGCCCGTTGAAGAGACTTGGCCTTATCTTTGGCGGCAAAGATAAACTAGTGAGGAGGTCTTTGTCAAAAGATCAAATAAATGATGAAGATAAGTCTGGTCGACAATCACTCTCAAGTTTCTTTGACAGCAAGTCATCTTTGTTTTCAAAGAAACCTCCAAAGTCTGGATCCCCTCCTCCTTCTGAGAAATCTTCTCTAGATACTGGTTGGACAGTTGTATAG 2145 0.4275 MEEQTFVSRARIAFHSAAAKAERVLMDFKSDREDHNKPLSPEADSPKNNGNESKIRSELKHIKWRPPHIGIKQDWQDRIKSIRRGRKEVEDTDKAGDANMAIPFYDDNLYTLNVKNDLDAKASELYPSVESLTAATKDPIPPSSVLKQLAVAVEFYSMSLHSVYLAAKFSFSIWLIFVEFMAGSKVKSIKDFIASSGGSSPAKERAGLSLSSVKALVLRDKDKLTSEFTSNEKVVQLINSLFDPEGDFLRRKINSNIEETAMTSLPRDIHGAPAESLVVKLAEILGNYKTVRKMALFWCRVVAELRKLWSEEQHIPGVPQNEIPDLKSCLLYQHFQVINCCISRKRFRFIATESLDSMMMQASSDTKESSDYNAGAPASPVLYARLNTGELVLRLGADRLAGDITLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASAEDSDVFDSSELLSAKGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIHPPDLFGQLFVSLLGLGLAIAEPMLSSNSDFSKLFYDCKEYVVAACQSNKMNEKVDDLVQAYETVERMLLNPEEALKMIKQTEESTMVTDEAKSPLKRLGLIFGGKDKLVRRSLSKDQINDEDKSGRQSLSSFFDSKSSLFSKKPPKSGSPPPSEKSSLDTGWTVV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00885 714 MobiDBLite consensus disorder prediction 27 53 - -
Spst8g00885 714 Pfam Rab3 GTPase-activating protein catalytic subunit 394 546 IPR026147 -
Spst8g00885 714 MobiDBLite consensus disorder prediction 673 693 - -
Spst8g00885 714 MobiDBLite consensus disorder prediction 664 714 - -
Spst8g00885 714 MobiDBLite consensus disorder prediction 27 41 - -
Spst8g00885 714 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 55 700 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00885 Spst-Chr8 7832027 7842330 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00885 K18270 - gmx:100818643 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00885 8 7832027 7842330 Spst8g00885 8 7832027 7842330 ECH
Spst6g02011 6 19953031 19964430 Spst8g00885 8 7832027 7842330 PCT