Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00751 ATGCGGCTCCGATTCTTAGCGTTGGTGTGTCTGTCTTGTTGTTGGCTTGTCTCGGGCGAGGGTGAAATGGTGTCGTGTTCCGACATAGTGCCGTTGGGGTACCGCAGCGACAAAATTTCCATTACTGAATTTGGCGGCGTGGGTGATGGGCGCACCCTCAACACTAAGGCCTTTCGAGAGGCCATATACAGGATTCAGCACTTGCCACGTGAAGGAGGCACGCTCCTTTACGTCCCTCCCGGGGTATACTTAACGGAACCCTTCAACCTCACCAGCCACATGACGCTCTTCCTCGCTGCCGGTGCCGTTATCACGGCCACGCAGGATTCATCGAATTGGCCTTTGATCGCACCCTTGCCTTCTTATGGAAGAGGAAGGGAGCTGCCTGGAGGAAGGTATATGAGTTTTATACATGGAGATGGTGTTCAGGATGTGGTAATCACTGGTGAAAATGGGACAATTGATGGACAGGGAGATGCCTGGTGGAATAAGTGGAGGCAGGGAACTCTTCTGTTTACCAGACCAAACCTTGTCGAGTTTGTGAATTCTAGAGATATTATTATTTCAAATGTAATCTTCAAGAATTCTCCCTTCTGGAACATACACCCTGTTTACAGCAGCAATGTTGTTGTGCGATTTGTCACCATTTTGGCTCCACGTGACTCTCCAAACACTGATGGCATTGATCCAGATTCAAGTTCAAATGTGTGCATAGAGGATTCATACATATCTACTGGAGATGATCTTGTGGCTGTGAAGAGTGGATGGGATGAATATGGGATTGCTTATGGCAGGCCTAGCTCTAACATCACCATCAGGCGGGTAAGTGGATCATCCCCATTTGCTGGGATTGCTATTGGCAGTGAAACCTCTGGTGGAGTGGAGAATGTACTTGCTGAACACATCAACCTTTACAAAATGGGAATTGGTATCCACATTAAGACCAACAGTGGCAGGGGTGGATTTATAAAGAATATAACCATGTCTCATGTGTATATGGAGGATGCAAGGAAGGGAATGAGGATCTCAGGTGATGTTGGGGGCCACCCTGATGACAAATTTGATCCTAATGCTCTCCCTCTAGTGAAGGGTGTGACAATTAAGAATGTTTGGGGTGAAAAGGTTTTGCAAGCTGGCTTGATACAAGGGGTGAAAAATTCACCTTTCACTGATATTTGCCTGTATGATATCAACCTTCATGGAGTGACAGGACCTAGAACTCCTCCTTGGAAGTGTTCTGATGTGTCTGGATTTGCTCATCAGGTTAGCCCTTGGCCATGTTCCGAGCTTAACAGCAACCAGCAGGGATCATGTGCCAATTACTCCTGA 1329 0.4725 MRLRFLALVCLSCCWLVSGEGEMVSCSDIVPLGYRSDKISITEFGGVGDGRTLNTKAFREAIYRIQHLPREGGTLLYVPPGVYLTEPFNLTSHMTLFLAAGAVITATQDSSNWPLIAPLPSYGRGRELPGGRYMSFIHGDGVQDVVITGENGTIDGQGDAWWNKWRQGTLLFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYSSNVVVRFVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSNITIRRVSGSSPFAGIAIGSETSGGVENVLAEHINLYKMGIGIHIKTNSGRGGFIKNITMSHVYMEDARKGMRISGDVGGHPDDKFDPNALPLVKGVTIKNVWGEKVLQAGLIQGVKNSPFTDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSELNSNQQGSCANYS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00751 442 Gene3D - 25 420 IPR012334 -
Spst8g00751 442 PANTHER PECTIN LYASE-RELATED 29 436 - -
Spst8g00751 442 SUPERFAMILY Pectin lyase-like 34 430 IPR011050 -
Spst8g00751 442 SMART pbh1 323 344 IPR006626 -
Spst8g00751 442 SMART pbh1 233 265 IPR006626 -
Spst8g00751 442 SMART pbh1 294 315 IPR006626 -
Spst8g00751 442 SMART pbh1 267 288 IPR006626 -
Spst8g00751 442 SMART pbh1 206 232 IPR006626 -
Spst8g00751 442 Pfam Glycosyl hydrolases family 28 135 416 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00751 Spst-Chr8 6931896 6935683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00751 6 432 Glycoside Hydrolase AT4G23820 72.791 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00751 - - gmx:100818820 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02467 6 57126059 57133317 Spst8g00751 8 6931896 6935683 PCT