Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00656 ATGATGATCTTCAAAGCTTTCACCCTTTGGTCCATGTGGCTGAACTTGGCTCATTTATCAATAGGTGGTCTGAGGAATTACAAGTTTGATGTGGAGTACATGATCCAGAAACCAGATTGCATTGAGGAAATTGTGATGGGAATCAATGGCCAATTTCCTGGCCCCACCATCAGAGCTCATGTTGGAGACATCCTTCATATTGCTGTCACCAATAAGCTTTTCACAGAAGGAACAGTCATCCACTGGCACGGAATTAGACAGAATGGAACACCTTGGGCAGATGGAACTGCTTCAATTTCACAGTGTGCTATAACGCCTGGTGAAACTTTTCATTACAGATTCACAGTGGACAAGGCAGGTACGTACTTCTACCATGGACACTATGGTATGCAGAGAGCAGCAGGGTTGTATGGTTCTCTGATAGTGGATTTAGCAGAGGGAAAGAAAGAGGCATTCCATTATGATGGTGAGTTCAACCTTTTGCTGAGTGATTGGTGGCACAAAACCACAAATGAACAAGAGGTTGGTCTCTCTTCCATTCCATTCAGATGGGTGAATGACCCTAAGTCTTTGCTCATAAATGGAAGGGGGCAATATAATTGTTCAATGGCAGCTCATCTTATTAAAACCACACTGCCACAGTGTAAGTTTGAATTGGGTGAAGAATGTGCACCCCACATTCTTCAAGTAGATCCAAACAAGACTTACAGGATAAGGATTGCCAGCACAACTTCCCTTGTATCTCTCCATTTTGCCATTGCAAACCACAAAATGATGGTGGTGGAAGCTGATGGAAACTACGTGCAACCATTTTCCACAGACATCATACACATACACTCCGGGGAGAGCTACTCAGTCCTCATCACCACAAACCAAGATCCAAACAAAAATTATTGGATATCAGTTGGTGTAACAGGAAGAGAAACCACCCCTCAAGCATTCACCATTCTAAACTACAAAAATATCCCTAACTCACTTTTCCCTACTTCTCCACCCCCCTTCACATCTTGTTTTGGTGGCTACAATCTCACCAAAGCATTCACTCACAAAATTCTTGCCCTTAAAGGAACCCCACCACCTCCACATTACTATAACAGAAGACTCCTCCTTCTCAACACAGAAAACTTAGTTGATGGATGTGACAAATATGCCATCAACAACATCTCCTTAGTATTACCCTCAACTCCTTACTTGGGTGCCATCAAGTATAAAATCAATGGTGCATTTGACCAGAATCCCCCTCCTGATAACTTCTCAGCAGATTATGATATCTTCAACCCTCCGTTAAACCCTAATTCAAAAAGTGGAAATGGGGTTTACACCTTTGAGTTGAACCACGTGGTTGATGTGATACTCCAAAATGCCAATTCCTTGAATGAGAAAAATATCAGTGAGATTCACCCGTGGCATTTGCATGGACATGACTTCTGGGTTTTGGGGTATGGGGATGGGAAGTTTGAACAGGGTGATGAGAGGAAATTCAACTTGAAGAACCCACCATTGAGGAACACTGCAGTGATATTCTCATATGGTTGGACTGCTTTGAGGTTTAAGGCAGATAACCCTGGAGTTTGGGCCTTCCATTGTCACATTGAACCTCACTTGCAGATGGGAATGGGAGTGGTTTTTGCTGAGGGTGTTGAACGTGTGGAGAGTATACCTGGAGATGCTATAAGATGTGGCTTCACCAGGAACATTGCCATGAACAAGAAACATAATTGA 1722 0.4303 MMIFKAFTLWSMWLNLAHLSIGGLRNYKFDVEYMIQKPDCIEEIVMGINGQFPGPTIRAHVGDILHIAVTNKLFTEGTVIHWHGIRQNGTPWADGTASISQCAITPGETFHYRFTVDKAGTYFYHGHYGMQRAAGLYGSLIVDLAEGKKEAFHYDGEFNLLLSDWWHKTTNEQEVGLSSIPFRWVNDPKSLLINGRGQYNCSMAAHLIKTTLPQCKFELGEECAPHILQVDPNKTYRIRIASTTSLVSLHFAIANHKMMVVEADGNYVQPFSTDIIHIHSGESYSVLITTNQDPNKNYWISVGVTGRETTPQAFTILNYKNIPNSLFPTSPPPFTSCFGGYNLTKAFTHKILALKGTPPPPHYYNRRLLLLNTENLVDGCDKYAINNISLVLPSTPYLGAIKYKINGAFDQNPPPDNFSADYDIFNPPLNPNSKSGNGVYTFELNHVVDVILQNANSLNEKNISEIHPWHLHGHDFWVLGYGDGKFEQGDERKFNLKNPPLRNTAVIFSYGWTALRFKADNPGVWAFHCHIEPHLQMGMGVVFAEGVERVESIPGDAIRCGFTRNIAMNKKHN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00656 573 NCBIfam L-ascorbate oxidase 25 562 IPR017760 GO:0005507|GO:0005576
Spst8g00656 573 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Spst8g00656 573 Gene3D - 11 143 IPR008972 -
Spst8g00656 573 Gene3D - 359 573 IPR008972 -
Spst8g00656 573 SUPERFAMILY Cupredoxins 12 171 IPR008972 -
Spst8g00656 573 Gene3D - 152 357 IPR008972 -
Spst8g00656 573 SUPERFAMILY Cupredoxins 364 561 IPR008972 -
Spst8g00656 573 Pfam Multicopper oxidase 158 321 IPR001117 -
Spst8g00656 573 PANTHER MULTI-COPPER OXIDASE 43 546 IPR045087 -
Spst8g00656 573 FunFam L-ascorbate oxidase 358 571 - -
Spst8g00656 573 Pfam Multicopper oxidase 434 546 IPR011706 GO:0005507|GO:0016491
Spst8g00656 573 CDD CuRO_3_AAO 365 554 IPR034267 GO:0005507
Spst8g00656 573 Pfam Multicopper oxidase 32 143 IPR011707 GO:0005507
Spst8g00656 573 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Spst8g00656 573 FunFam Laccase 2 150 345 - -
Spst8g00656 573 SUPERFAMILY Cupredoxins 152 354 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00656 Spst-Chr8 6063477 6067069 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00656 K00423 - gmx:102666289 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00656 8 6063477 6067069 Spst8g00656 8 6063477 6067069 ECH
Spst1g02668 1 35138564 35142734 Spst8g00656 8 6063477 6067069 ECH
Spst7g00536 7 4929827 4932661 Spst8g00656 8 6063477 6067069 ECH