Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00536 ATGAGAGCAGGAGTTTGTAGCATACAGCTACAAGCTTTGACGCCAGAGGCTGCAGCCCTAGTTAAGCAAGCTGTTACTCTTGCCACAAGAAGAGGACATGCTCAAGTGACCCCTCTTCATATTGCTACTGTCATGCTTGCTACTTCCACTGGCCTTCTCCGTAAAGCTTGCCTTCAATGCCACTCTCACCCTCTTCAATACAAGGCATTAGAACTTTGCTTCAATGTTTCCCTCAACCGTTTGCCTGCATCCACACCGAGCCCTCTTTTGAGTACTTCATATTCCACCACTCCCTCACTCTCCAATGCCTTAGTTGCGGCCTTCAAGCGAGCTCAGGCTCACCAACGCCGTGGCTCCATTGAGAACCAGCAGCAACCCATTCTGGCCTTGAAGATTGAGGTGGAGCAGCTCATAGTCTCTATCCTTGATGACCCTAGTATTAGCAGGGTCATGAGAGAAGCTGGTTTCTCTAGTGCCCTTGTTAAAACCAGGGTTGAACAAACTGTTTCAATGGAAGTTTGTTCACAAGAACAAGCATCCAAGGAAAACACTAGCAAGATTCAAGTTCTTGGTGGTAGAAACATGTCCCCACCAAGATCTCTTAGTCAATTTGGGGGCTCATTCATCAAGTCTATGGACCATGTTGATAATGAGGTTGCTTGTATAGATGATGCAAATAGTGCTTTGAATGAACTTGTGAGCAAGAGGAGAAACACAGTCATTGTTGGGGAGAGTCTTGCTAGTGCCGAGGGAGTAGCTAGGGGAGTGATGGAAAGGTTGGAGAGAGGGAATGTTCAAGGAGAGTTGAGGTTTGTGCAATTTGTGAGTCTTCCTCTTGTCTCCTTCAGGAACATTAGCAAGGAGGAGGTTGAAAGGAAGCTAGTAGAGCTTAGAAGCCTAGTAAAATGTCACGTGGGAAGAGGGTTTATTCTATACTTGGGTGATCTCAAGTGGTTGTTTGAGTTCTGGTCAAGTTATTGTGAGCAAAGAACAAATTATTACAATTCCGTGGAGCATATGGTGATGGAGCTTAAAAAATTGATTAGTGGAAACGGGGAGAATGTAAGATTGTGGTTAATGGGGATAGCAACTCTTAGAACATACATGAAGGGCAAAGCATGTCACCCCTCCCTTGAAACTATTTGGGATCTTCACCCTTTTACAGTTCCGGTTGGTAGCCTGAGCCTTGGTTTAAATTTTGATAGCGATTTTCAAGTTCAGGAGAGAAGCAAGGTAACATTCAAGGACGAATCTTTTGAAGAACGTGCCAAAGTGCGCAAACAACTAACTTGCTGCAGAGATTGCTCATTGAATTTTGAAAAAGAGGCTAAAAGCATCGCTAGTAGTATTACTATAAGCAATAGAGATTGCACTACTAGCTTGCCAACATGGCTCAAAAATTGCAAGGAAGAGAGAAGTCACGTGATGGATAATCAGGAGAATGCTAAGCTTAGGGATATCTGCAAGAAATGGAACTCATTTTGCAGTTCAGCACATGGATATCCCTCCAATCTTGAGAAGCAATTTTTGTTGATTTCATCCTCACCTTCATCCCCTACTTCATTCTCTTCACATGAAAGAAAGTGTAGCTTGAATCTTAGCCACCGAAATTGGCCAGTCATTTCAGAACCAAAAGAAGAACCTAAAGAATGTAATTTATACACTGAGACTACTGTTAGTGATGAGTGTTATGAAGGAAACTTGATAATGTTCATGCCAGAGAGAAACATCCCTAAGCCAGATCTTTTGTCTAATCCCAATTCTAGCCCCAATTCTGCTTCTTCAAGTGAGGCAGTGGAAGGTTTGGATAGCACTCAAATGTTCAAGGAACATAATGATGAGAATCTCAAGATTCTCAGTGATTCATTGCAGAAAAAGGTTACACAAAATAAAGAAATGGCTAAGGAGATTGCTAGCACTGTGCTTCTTTGCAGGTCAGGAATGAGAAAAGGAGATAATCACTTGGTGAAGAGAGAAGATAGACAAGAAACTTGGTTTTTCTTTCTAGGTATGGATTATAAAGCAAAAGAAATGGTCTCAAAAGAGCTTGCTAAAGTTGTCTTTGGCTCTTATAGTAACTTCCACTCCATTGGTGTAAGCAGTTTCTCTACCTCAAGAGGTGGTGATTCGACTAATGAGGAGTCCAAAAGTAAAAGACCAAGAGATGAGTTTGGTGGCAGTTATCTTCAAAGATTTGGGGAAGCTGTAAATGAGAATCCTCATAGGGTGTTCTTCATGGAAGATTTGGAGCAAGTTGATCACTTTTCAAAAAAGGGTGTTAAGAAAGCAATTGAAAGTGGAACTATAACCCTTCCTGGGGGTGAATCTGTGCCTCTCAAGGATGCAATTGTCATTTTCAGCTGTGAAAGCTTTAGTTCAGTGTCAAGAGCCTCTTCTCCTGCAAGAACTACTTCTCCATCTTCTGATGAAAACTTGGAGAAAGAGAATATCAATGACTCAGAGGAGAAAATTCCATGGCTTTCTCTGGATCTGAACATGGCCATTGAAGTTGATGCACCAAAAAATGTGCATTTAGATGGAGTCACTGCTGAGATCCTGGAGTTAGTTGATAAGAAAATTAAGTTTAAAATATGA 2595 0.4185 MRAGVCSIQLQALTPEAAALVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKACLQCHSHPLQYKALELCFNVSLNRLPASTPSPLLSTSYSTTPSLSNALVAAFKRAQAHQRRGSIENQQQPILALKIEVEQLIVSILDDPSISRVMREAGFSSALVKTRVEQTVSMEVCSQEQASKENTSKIQVLGGRNMSPPRSLSQFGGSFIKSMDHVDNEVACIDDANSALNELVSKRRNTVIVGESLASAEGVARGVMERLERGNVQGELRFVQFVSLPLVSFRNISKEEVERKLVELRSLVKCHVGRGFILYLGDLKWLFEFWSSYCEQRTNYYNSVEHMVMELKKLISGNGENVRLWLMGIATLRTYMKGKACHPSLETIWDLHPFTVPVGSLSLGLNFDSDFQVQERSKVTFKDESFEERAKVRKQLTCCRDCSLNFEKEAKSIASSITISNRDCTTSLPTWLKNCKEERSHVMDNQENAKLRDICKKWNSFCSSAHGYPSNLEKQFLLISSSPSSPTSFSSHERKCSLNLSHRNWPVISEPKEEPKECNLYTETTVSDECYEGNLIMFMPERNIPKPDLLSNPNSSPNSASSSEAVEGLDSTQMFKEHNDENLKILSDSLQKKVTQNKEMAKEIASTVLLCRSGMRKGDNHLVKREDRQETWFFFLGMDYKAKEMVSKELAKVVFGSYSNFHSIGVSSFSTSRGGDSTNEESKSKRPRDEFGGSYLQRFGEAVNENPHRVFFMEDLEQVDHFSKKGVKKAIESGTITLPGGESVPLKDAIVIFSCESFSSVSRASSPARTTSPSSDENLEKENINDSEEKIPWLSLDLNMAIEVDAPKNVHLDGVTAEILELVDKKIKFKI 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00536 864 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 863 - -
Spst7g00536 864 MobiDBLite consensus disorder prediction 702 724 - -
Spst7g00536 864 MobiDBLite consensus disorder prediction 579 602 - -
Spst7g00536 864 Pfam Clp amino terminal domain, pathogenicity island component 24 55 IPR004176 -
Spst7g00536 864 Pfam Clp amino terminal domain, pathogenicity island component 132 167 IPR004176 -
Spst7g00536 864 Gene3D - 594 829 IPR027417 -
Spst7g00536 864 SUPERFAMILY Double Clp-N motif 13 164 IPR036628 -
Spst7g00536 864 Gene3D - 9 171 IPR036628 -
Spst7g00536 864 MobiDBLite consensus disorder prediction 581 602 - -
Spst7g00536 864 MobiDBLite consensus disorder prediction 796 817 - -
Spst7g00536 864 ProSiteProfiles Clp repeat (R) domain profile. 10 172 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00536 Spst-Chr7 4929827 4932661 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00536 - - gmx:100775479 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00536 7 4929827 4932661 Spst7g00536 7 4929827 4932661 ECH
Spst7g00536 7 4929827 4932661 Spst8g00656 8 6063477 6067069 ECH