Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00485 ATGTCGAAGCAGACATACAGCGTGTGCTTCTGCTGGAGGCGGCGGTTCAAGCTGGCCCTGGCGGAGGCGCCGTCGGAGATCAAGACTCTCTTCGAGGAGTACTCCGAGAATGAGATCATGACGCCTTCGCATCTGAAAAGGTTCCTGGTTGAAGTGCAAAAGCAAGAGAAGGCCACTGAAGAAGATGCGCAAGCCATCATCGACAGCTTCAGGCATTTCCATCGCAGAGGCGTTGGCCTCAACCTCGAATCTTTCTTCAAGTACCTCTTCGGTGAAGACAACCCTCCTCTTCTTCCTTCTCATGGGGTGAACCACAATATGAATTTACCCTTGTCACATTATTTCATATATACTGGGCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGCGACTGCAGTGATGTACCCATCATAAATGCACTGAAGAGAGGTGTGAGGGTGATTGAATTGGACATATGGCCTAATGCAGCAAAGGATAATATAGATGTTCTTCATGGAAGAACATTGACTACTCCTGTAGAGCTCATCAGATGTTTAAGATCTATTAAGGAATATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTGACACCGGATCTTCAGGCTAGAGTGGCTGAGATGGTTACACAAACTTTTGGAGACATTCTATTTACTCCTAACACCGATAGTGTGAAGGAGTTCCCTTCTCCTGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCACCTAAGGAGTACCTTGGGGCAAATGAAAAAGGTAAAGGGGATGATTCACATGAAAAGGTAAAGGGGGATGATTCACAACACCGAAAGCCATCAGGAGAGGATGAAACTTGGGGGAAGGAATTTCCTAGCTTGAAAGGTGGTACTCTGGATGATTTCAAGGACTACAATGTGGAGGAATATCTTAATGATGAGGAAGAATCTGATGAATTAGATAAGTCACAACATAATGAAGCTCCAGAATATAGACACCTAATCGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAGAGGAATGCCTCAAAGTGGATCCTAATAAAGTGAGACGTCTGAGTTTAAGTGAGCAACAGCTTGAGAAGGCTGCTATAAATCATGGAAAGCAAATTGTCAGGTTTACACAGCGGAATATTTTGAGGGTGTATCCCAAAGGTACACGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGGTTATGGTAGATCTCTTTGGTTAATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTATTAAATTCTGGTCCAGATAATGAGGTCTTCGATCCTAAAGCCAAGTTACCTGTGAAGACTACTTTGAAGGTAACTGTATATATGGGGGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATACTCACCTCCAGACTTCTACACAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTGTAATGAAGAGAACAAGGGCAATAGAGGATAATTGGTTACCTACATGGAATGAGGTATTTGAGTTCCCTCTTACTGTTCCAGAGTTGGCCTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCAATCTGGGAGCTAAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAAGGAGAGAAATACAACTCTGTAAAGCTTCTCATGCGCTTTGAGTTTATTAATTGA 1794 0.4275 MSKQTYSVCFCWRRRFKLALAEAPSEIKTLFEEYSENEIMTPSHLKRFLVEVQKQEKATEEDAQAIIDSFRHFHRRGVGLNLESFFKYLFGEDNPPLLPSHGVNHNMNLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNAAKDNIDVLHGRTLTTPVELIRCLRSIKEYAFVASEYPVVITLEDHLTPDLQARVAEMVTQTFGDILFTPNTDSVKEFPSPESLKKRIIISTKPPKEYLGANEKGKGDDSHEKVKGDDSQHRKPSGEDETWGKEFPSLKGGTLDDFKDYNVEEYLNDEEESDELDKSQHNEAPEYRHLIAIHAGKPKGGLEECLKVDPNKVRRLSLSEQQLEKAAINHGKQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLNSGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTVMKRTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGEKYNSVKLLMRFEFIN 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00485 597 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 91 IPR015359 -
Spst8g00485 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 361 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00485 597 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Spst8g00485 597 FunFam Phosphoinositide phospholipase C 21 100 - -
Spst8g00485 597 ProSiteProfiles C2 domain profile. 449 578 IPR000008 -
Spst8g00485 597 FunFam Phosphoinositide phospholipase C 463 596 - -
Spst8g00485 597 Gene3D - 21 101 - -
Spst8g00485 597 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00485 597 SMART plcy_3 331 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00485 597 Gene3D C2 domain 463 597 IPR035892 -
Spst8g00485 597 MobiDBLite consensus disorder prediction 252 293 - -
Spst8g00485 597 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Spst8g00485 597 PRINTS Phospholipase C signature 562 572 IPR001192 GO:0035556
Spst8g00485 597 PRINTS Phospholipase C signature 407 425 IPR001192 GO:0035556
Spst8g00485 597 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Spst8g00485 597 PRINTS Phospholipase C signature 386 407 IPR001192 GO:0035556
Spst8g00485 597 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Spst8g00485 597 SUPERFAMILY EF-hand 24 101 IPR011992 -
Spst8g00485 597 SMART C2_3c 468 576 IPR000008 -
Spst8g00485 597 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 595 IPR001192 GO:0035556
Spst8g00485 597 MobiDBLite consensus disorder prediction 255 290 - -
Spst8g00485 597 Pfam C2 domain 469 569 IPR000008 -
Spst8g00485 597 SUPERFAMILY PLC-like phosphodiesterases 105 449 IPR017946 GO:0006629|GO:0008081
Spst8g00485 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Spst8g00485 597 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 461 IPR017946 GO:0006629|GO:0008081
Spst8g00485 597 SMART plcx_3 105 249 IPR000909 -
Spst8g00485 597 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 468 596 IPR035892 -
Spst8g00485 597 CDD C2_PLC_like 466 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00485 Spst-Chr8 4553718 4558126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00485 1 596 Acyl Lipid Metabolism Gene Families AT3G55940 67.388 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00485 K05857 - gmx:547864 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00485 8 4553718 4558126 Spst8g00485 8 4553718 4558126 ECH
Spst8g00108 8 856098 856779 Spst8g00485 8 4553718 4558126 ECH
Spst8g00485 8 4553718 4558126 Spst8g00485 8 4553718 4558126 PCT