Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00108 ATGGAAGGAATGTTCAGAGCCAATTGCGGCTATGGTTACGTTAAGAAACCAGACATATTGTTGAATGAAGACGAGGTTTTTGATCCAAAAGCATTACGACCAGTCCAGAAAGTTCTTCAGGTCTTGGTTTACATGGGTGATGGGTGGCGTTCAGATTTCGGCCCAACACATTTTGACTTCTATTCTCCTCCTGACTTCCGTGTACAGATTGGTATTCATGGTGTTCCAGCTGATAAAAGTATGAAATACACAAGGACAATTGAAGATGATTGGGTACCATTGTGGAATGAAGAGCTCAGTTTCCCATTGACAGTTCCAGAATTGGCTCTGTTATACATCAAAGTCATTGAACGTGACTTTTCAGGGAGTCATGACTTTGGTGGACAAACATGTTTACCTGTCTCTCAACTCAGACAGGGCATTCGTGCAGTTCGTTTGCGTAACCGCAAGGGTGAACTTTACAAGTCCGTAAGGCTTCTCGTCCATTTTCATTTTGTTGATGCTGCGTAA 510 0.4275 MEGMFRANCGYGYVKKPDILLNEDEVFDPKALRPVQKVLQVLVYMGDGWRSDFGPTHFDFYSPPDFRVQIGIHGVPADKSMKYTRTIEDDWVPLWNEELSFPLTVPELALLYIKVIERDFSGSHDFGGQTCLPVSQLRQGIRAVRLRNRKGELYKSVRLLVHFHFVDAA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00108 169 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 165 IPR001192 GO:0035556
Spst8g00108 169 SUPERFAMILY PLC-like phosphodiesterases 1 32 IPR017946 GO:0006629|GO:0008081
Spst8g00108 169 Pfam C2 domain 64 140 IPR000008 -
Spst8g00108 169 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 166 IPR035892 -
Spst8g00108 169 SMART C2_3c 38 146 IPR000008 -
Spst8g00108 169 CDD C2_PLC_like 37 165 - -
Spst8g00108 169 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 2 20 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00108 169 Gene3D C2 domain 34 169 IPR035892 -
Spst8g00108 169 ProSiteProfiles C2 domain profile. 15 148 IPR000008 -
Spst8g00108 169 FunFam Phosphoinositide phospholipase C 33 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00108 Spst-Chr8 856098 856779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00108 1 166 Acyl Lipid Metabolism Gene Families AT3G55940 61.446 1.03e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00108 K05857 - gmx:100817915 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00108 8 856098 856779 Spst8g00108 8 856098 856779 ECH
Spst8g00108 8 856098 856779 Spst8g00485 8 4553718 4558126 ECH