Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00479 ATGAACGGCGACTTCTCCCGCCGCTCCTCCGCCACAAAAGATGACGGCGACCCCGCGGTGTGGACGGCGGTCGACGAAAGTCTCCGCGAGGTGCAGTCGATGTTGGACCGTAACCGCCGCCTGATCGAGGAGGTGAACGAGAACCAACAATCTAGGCTCCGTCACAACATGGTCAAGAACGTGTCTCTCATTCAAGAGCTCAACGGCAACATCTCCAAGGTCCTCTCTCTCTACTCCGATCTTAACTCCAATTTCTCCGTCGCCTTCCAATACCACCACTCCGCCGCCAACGTCGCACGTGACAAATCGTGA 312 0.5705 MNGDFSRRSSATKDDGDPAVWTAVDESLREVQSMLDRNRRLIEEVNENQQSRLRHNMVKNVSLIQELNGNISKVLSLYSDLNSNFSVAFQYHHSAANVARDKS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00479 103 Pfam Early Flowering 4 domain 16 94 IPR009741 -
Spst8g00479 103 Coils Coil 24 48 - -
Spst8g00479 103 PANTHER PROTEIN ELF4-LIKE 4 11 94 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00479 Spst-Chr8 4523450 4523761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00479 - - ccaj:109790811 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02112 1 29300777 29301814 Spst8g00479 8 4523450 4523761 PCT