Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02112 ATGTCTGATTTTCTCCAATATATCCAAATTGCTAAAGGGGGCTCATACTTCACAAAATATTTCCAATGTCTGACCAAACAAGACATTGTTGAGTCCTCTCTCTGTGTTTCATGCACGGCACATAACTCATCTTTCTCCGCCGCAGACGCCACCATGGAAGACCCCTCCAGCCACCGCCGATCCAAGAAGCACCACCGCCGCCATAACGGACACCATCCAGCCGCCACCACCACTACGGTGAGCACGACGACCGGGGAGTCCGACGGGGAGGTGGAGGAGGCGGAGGACGGCGACCCGGAGGTGTGGGCGACCCTGAACAAGGGGTTCCGGCAGGTGCAGTCGGTGCTGGACCGGAACCGGCTACTGATTCAGCAGGTGAACGAGAACCAGCAGTCTCGGATGCACAACAACATGGTTAAAAACGTTTCCCTCATTCAGGAACTCAACGGCAACATCTCCAAGGTTGTCTCTCTCTACTCTGATCTCAACAGCAATTTCACCAACGTATGCCAACACCGCTCCAAAAACCCTTCCAAATAG 540 0.5389 MSDFLQYIQIAKGGSYFTKYFQCLTKQDIVESSLCVSCTAHNSSFSAADATMEDPSSHRRSKKHHRRHNGHHPAATTTTVSTTTGESDGEVEEAEDGDPEVWATLNKGFRQVQSVLDRNRLLIQQVNENQQSRMHNNMVKNVSLIQELNGNISKVVSLYSDLNSNFTNVCQHRSKNPSK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02112 179 PANTHER PROTEIN ELF4-LIKE 4 80 175 IPR040462 GO:0042753
Spst1g02112 179 MobiDBLite consensus disorder prediction 46 98 - -
Spst1g02112 179 MobiDBLite consensus disorder prediction 73 87 - -
Spst1g02112 179 Pfam Early Flowering 4 domain 97 175 IPR009741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02112 Spst-Chr1 29300777 29301814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02112 - - var:108328510 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02112 1 29300777 29301814 Spst8g00479 8 4523450 4523761 PCT