Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00335 ATGGCTCTGGCTTCCTCTGTTTCACTCTCTCCACTCTCGGTGCTTCTCTTTACCTTCTTCTTCTTCTTCATCTTCTCCACTTCCTCCTCCGCCAACCATGATTCTTTCTCGTTCTCTTTCCCTCTGACCTCGCTTCCCCTCTCCACAGAGAAGCCTCTCAACACGAATCCAAAACTCAGAACCCTTTCCTCTGCTTCCGACAACATAAAATCGTCGTTCAAGTACTCGATGGCTCTGGTGGTAACCCTCCCCATAGGGACCCCTCCGCAGCATCAACAAATGGTGTTGGACACGGGAAGCCAACTCTCGTGGATTCAGTGCCATAAACCAACGGCCTCGTTTGACCCTTCGCAGTCCTCCTCCTTCTACGTCATCTCCTGCACCCACCCTCTCTGCAAACCCCGCGTTCCCGATTTTACGCTCCCCACAACCTGCGACCAGAACCGCCTCTGTCACTACTCTTACTTCTACGCCGATGGCACCTACGCCGAGGGCAACCTCGTCCGAGAAAAACTAACCTTCTCTCCTTCCCAAACCACCCCTCCACTTACCCTCGGCTGCGCCACCGAATCCAGCGATGCCAGGGGCATCCTCGGAATGAACCTCGGCCGCTTGTCCTTCCCCTCGCAGGCCAAAATCACCAAATTCTCGTACTGCGTGCCCACCCGACGAACCCAACCGGGGAACCTCCCAACCGGCTCGTTCTACCTCGGCAACAACCCCAACTCCGCACGCTTCCGTTACGTAAACATGTTGACCTTTGGTCAAAGTCAACGTATGCCGAATTTGGACCCGTTGGCCTACACCGTCCCCATGCAGGGAATTAGAATCGGTGGCAAGAGGCTAAACATTAATCCTTCAGTTTTCCGCCCCAACGCTGGTGGGTCGGGTCAGACCATGATAGACTCCGGATCCGAATTCACGTTCCTGGTCGACGAGGCCTACGATAGGGTGCGGGAGGAGATAGTTAGAGTGGCGGGTCCCAGGATTAAGAAGGGGTACGTGTACGGCGGAGTGGCGGACATGTGTTTCGACGGTACCGGGAGGGAGACAATCGGACATTTGATAGGGGACGTGGCGTTCGAGTTCGAGAAAGGCGTGGAGATCGTGGTTCCGAAGGAGAGAGTATTGGCTGACGTGGGCGGTGGGGTCCAGTGCGTGGGAATCGGGAGGTCCGAGAGATTGGGTGCGGCCAGCAACATCATTGGAAACTTCCATCAGCAGAATCTATGGGTGGAGTTCGATCTGGCTAATCACAGAGTAGGATTCGGTGAGGCCGATTGTAGCAGATCGTAG 1296 0.5532 MALASSVSLSPLSVLLFTFFFFFIFSTSSSANHDSFSFSFPLTSLPLSTEKPLNTNPKLRTLSSASDNIKSSFKYSMALVVTLPIGTPPQHQQMVLDTGSQLSWIQCHKPTASFDPSQSSSFYVISCTHPLCKPRVPDFTLPTTCDQNRLCHYSYFYADGTYAEGNLVREKLTFSPSQTTPPLTLGCATESSDARGILGMNLGRLSFPSQAKITKFSYCVPTRRTQPGNLPTGSFYLGNNPNSARFRYVNMLTFGQSQRMPNLDPLAYTVPMQGIRIGGKRLNINPSVFRPNAGGSGQTMIDSGSEFTFLVDEAYDRVREEIVRVAGPRIKKGYVYGGVADMCFDGTGRETIGHLIGDVAFEFEKGVEIVVPKERVLADVGGGVQCVGIGRSERLGAASNIIGNFHQQNLWVEFDLANHRVGFGEADCSRS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00335 431 Gene3D Acid Proteases 235 431 IPR021109 -
Spst8g00335 431 ProSiteProfiles Peptidase family A1 domain profile. 79 424 IPR033121 -
Spst8g00335 431 FunFam Aspartyl protease family protein 59 234 - -
Spst8g00335 431 SUPERFAMILY Acid proteases 80 429 IPR021109 -
Spst8g00335 431 FunFam aspartic proteinase PCS1 238 431 - -
Spst8g00335 431 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 94 105 IPR001969 GO:0004190|GO:0006508
Spst8g00335 431 Pfam Xylanase inhibitor C-terminal 267 424 IPR032799 -
Spst8g00335 431 CDD pepsin_A_like_plant 80 428 IPR034161 -
Spst8g00335 431 Gene3D Acid Proteases 60 234 IPR021109 -
Spst8g00335 431 PANTHER ASPARTYL PROTEASE-RELATED 18 429 IPR001461 GO:0004190|GO:0006508
Spst8g00335 431 Pfam Xylanase inhibitor N-terminal 80 233 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00335 Spst-Chr8 3021219 3022514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00335 81 430 Miscellaneous Gene Families AT1G77480 24.211 1.84e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00335 - - gmx:100790706 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00335 8 3021219 3022514 Spst8g00335 8 3021219 3022514 ECH
Spst8g00335 8 3021219 3022514 Spst1g02280 1 31560393 31561739 PCT