Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00294 ATGGGGAACACCATGGGAAGGAGTAAAAAGGCAAAGGTCATGAAGGTGGATGGAGAAACGTTGAAGCTGAAAACTCCAGCCAGAGTAAACGACGTCGTCAAGGACTACCCCGGTCACGTTCTCCTGGACTCCGAAGCGGTGAAACATTTTGGGCTTCGGGCCAAGCCCCTTGAGCCTCACCAGGAATTGAAGCCCAAGAAAATCTACTTCCTCGTTGAGTTACCCAAGATTCAGCCCGAAGAGGAAAAAACGGCGCTGCATAGGAGGGTGCGATCCAGTGGTATCCGCGGCATGAACGCTAAGGATAGACTCGAGCTCTTGATGCTCTCCAAACGCTCCGTCTCGGACCTCGCCCTTGTCAGGCCCGGCCCCAATCTGGCCTCCGATGGGCCCATGCGGGTTAAGATGAGGCTCCCCAAGGCCCAGTTGGACAAGCTCATGGAGGAGAGCACCGACGGGTCCGAGGTGGCGGAGAAAATCATCAGTTTGTACATGGGAACCAATGCCGGCGAGGCTGACGGCGTTGAGGCGGCAGAGGACGGTGGCGCAAGGACGCTGCACCATCACACTCACAAACCACGTGGGAAACGAGTGAGTTTTAGCCCCGTGGAAAATGAAGAAATTCGCGTGGAAGCGCGTTCTCAATAG 648 0.5586 MGNTMGRSKKAKVMKVDGETLKLKTPARVNDVVKDYPGHVLLDSEAVKHFGLRAKPLEPHQELKPKKIYFLVELPKIQPEEEKTALHRRVRSSGIRGMNAKDRLELLMLSKRSVSDLALVRPGPNLASDGPMRVKMRLPKAQLDKLMEESTDGSEVAEKIISLYMGTNAGEADGVEAAEDGGARTLHHHTHKPRGKRVSFSPVENEEIRVEARSQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00294 215 Pfam PADRE domain 1 179 IPR025322 -
Spst8g00294 215 MobiDBLite consensus disorder prediction 179 215 - -
Spst8g00294 215 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 202 - -
Spst8g00294 215 MobiDBLite consensus disorder prediction 197 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00294 Spst-Chr8 2624468 2626913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00294 - - vra:106763161 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00294 8 2624468 2626913 Spst8g00294 8 2624468 2626913 ECH
Spst8g00294 8 2624468 2626913 Spst1g02235 1 30820974 30823888 ECH
Spst3g02240 3 64809111 64810567 Spst8g00294 8 2624468 2626913 ECH
Spst1g02235 1 30820974 30823888 Spst8g00294 8 2624468 2626913 ECH
Spst8g00294 8 2624468 2626913 Spst1g02235 1 30820974 30823888 PCT