Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02240 ATGGGTAACACCTTTGGTGCAAAGAAGACCACAAAGGTGATGAAGATTGATGGTGAGACATTCAAGTTGAAGACACCAGTGAAAGTTGAGGAAGTGCTTAAGGATCACCCTGGTCTTGTTCTGCTAGATTCTGAGGCTGTTAAGCACTATGGGGTGAGAGCAAAGCCTCTGGAATCACACAAGGAGTTGCAACCAAAGAGGCTCTATTTTCTTGTGGAGCTTCCCAAGGAGACAAAGCCAAGAAGGGTTCGTTCTGGCATTAACATGAGTGCCAAAGATCGCCTTGAGAACCTAGTGCTTACTAGGAGGTCTGCTTCTGATCTTTCAATCATGAAGCAAAGCAACATGGGTGATGGTGAACAAGGCAACAACAACAACAAGGAGAATAATGGTGGGGTGAGGTTGAAAATGAGGCTTCCAAAAGCTGAGGTGGAGAAGTTGATCCATGGTAGCAAAGATGAGGCTGAAGCAGCCCAGAGGATCGTGAAGCTGTACATGGCCAATGGCAGCAGAGAAACTGAGCAAAATGGTGAAAAGATGATGCTGTTTGATCCACAAACACACTGCAAAGACAGAGTTAAGGAGAGTCCAAAGAAGAGGGTGAGCTTTATGCCAATGAACGAAGGAGGGACTCAAGTGGCTGTGGCTTCATAA 654 0.4602 MGNTFGAKKTTKVMKIDGETFKLKTPVKVEEVLKDHPGLVLLDSEAVKHYGVRAKPLESHKELQPKRLYFLVELPKETKPRRVRSGINMSAKDRLENLVLTRRSASDLSIMKQSNMGDGEQGNNNNKENNGGVRLKMRLPKAEVEKLIHGSKDEAEAAQRIVKLYMANGSRETEQNGEKMMLFDPQTHCKDRVKESPKKRVSFMPMNEGGTQVAVAS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02240 217 MobiDBLite consensus disorder prediction 113 132 - -
Spst3g02240 217 MobiDBLite consensus disorder prediction 190 217 - -
Spst3g02240 217 Pfam PADRE domain 1 151 IPR025322 -
Spst3g02240 217 MobiDBLite consensus disorder prediction 113 131 - -
Spst3g02240 217 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02240 Spst-Chr3 64809111 64810567 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02240 - - aprc:113859116 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02240 3 64809111 64810567 Spst3g02240 3 64809111 64810567 ECH
Spst3g02240 3 64809111 64810567 Spst8g00294 8 2624468 2626913 ECH
Spst3g02240 3 64809111 64810567 Spst1g02235 1 30820974 30823888 ECH