Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00270 ATGGCTGCAGACCCTCAGAAAATTCACCCTATCCATGATGTTGAGGCACCAAACCACCCTTCAGCACCCTTGGTGCCAAGAAGCATGTCCAAATCTGATGCAGGTGATCCAGAAAGAGTAGTGGTACAACAACAAGAACAACAACATCCCCCACAACAAACCATTCCTGTGATGCATTCCAGGCCACCCAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTAATAAGCATATTGCTGATTCTGATTGTGGCCATTGCCATCACAGTTGGGATACTATACCTTGTGTTCAGACCAAAGGTTCCAAAGTACTCAGTAGATGAGCTTAGAGTCACACAGTTTGATGTCTCTGACAACAACAGTTTATCAGCCACTTTCAACTTGACAATCACTGCCAGAAACCCTAACAAGAAGATTGGAATATACTATAGAGGTGGCAGCCACATAAGTGCTTGGTACGAGGACACAAAACTATGTGAAGGGTCTTTGCCAAAATTCTACCAAGGTCACCGCAACACCACAGTGCTTAGTATCCCTCTCACTGGTCAAACACAGGATGCTACTGGCCTGCAGAGTAGTATTCAACAGCAGCTGCAAGAAACTGCGAATGTACCCCTCAATTTGAAGGTGAAGCAGCCTGTGAGAATCAAGCTTGGGAAGTTGAAACTGTTCACTATCAAGTTCAGGATTAGGTGCAAGATTGTGGTGGACAGCCTTAGTGCTAATAGTTCTATTAGAATTCGGAGCAGTAGTTGTAAATTCAGGTTTAGACTGTGA 783 0.4444 MAADPQKIHPIHDVEAPNHPSAPLVPRSMSKSDAGDPERVVVQQQEQQHPPQQTIPVMHSRPPKKRRSCCCRFFCWLISILLILIVAIAITVGILYLVFRPKVPKYSVDELRVTQFDVSDNNSLSATFNLTITARNPNKKIGIYYRGGSHISAWYEDTKLCEGSLPKFYQGHRNTTVLSIPLTGQTQDATGLQSSIQQQLQETANVPLNLKVKQPVRIKLGKLKLFTIKFRIRCKIVVDSLSANSSIRIRSSSCKFRFRL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00270 260 MobiDBLite consensus disorder prediction 1 63 - -
Spst8g00270 260 Gene3D - 97 242 - -
Spst8g00270 260 MobiDBLite consensus disorder prediction 41 55 - -
Spst8g00270 260 SUPERFAMILY LEA14-like 97 216 - -
Spst8g00270 260 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 29 242 - -
Spst8g00270 260 Pfam Late embryogenesis abundant protein 131 235 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00270 Spst-Chr8 2364151 2364933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00270 64 248 EF-hand Containing Proteins AT5G21130 32.979 4.85e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00270 - - gmx:100782663 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00270 8 2364151 2364933 Spst8g00270 8 2364151 2364933 ECH
Spst6g00252 6 2582036 2582767 Spst8g00270 8 2364151 2364933 PCT