Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00252 ATGATGGCAGAACACCAAAGAATTCATCCTGTTCATGATGTGGAGGCACCACACAGACCTTTGGTGCCTGGAAATGGTGCTAAATCTGATAGGGTTTTTCCTAAACGCACCTTTCCTGTGATGCATTCCAAGCCACCAAAGAGAAGAAGAAGCTGTTGCTGCAGGTTTTTGTGTTGGACACTTTGTATATTGCTGATCTTGATCATTGCTATTGGCATCACAGTAGGGATCATATACCTTGTGTTTAGGCCAAAGCTCCCCAAGTACTCGGTGGACCAACTGAGGATAACTCAGTTCAATGTTTCTGACAACAACACCCTCTCAGCCACCTTCAATGTGGCAATCACTGCAACAAATCCAAACAAGAAGATTGGGATATACTATGAGGGTGGAAGCCACATAAATGCTTTGTACATGGACACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGTCACAGGAACACCACGGTGCTTGATCTGTCTCTAATAGGTCAAGCACAGGATGCAAGTGCCCTACTGAGTAGAATTCAGGAGCAGCTGCAACAGACCAACAATATTCCCCTTGATCTTAAGGTCAATCAACCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTCAAGTTCAGGGTTAGGTGCAAGCTTGTGGTGGATAATCTTGGTGCTAGTAATGATATTAGTATTTCAAGCAGTATTTGTAAGTTCCGGCTTAGGCTATGA 732 0.4399 MMAEHQRIHPVHDVEAPHRPLVPGNGAKSDRVFPKRTFPVMHSKPPKRRRSCCCRFLCWTLCILLILIIAIGITVGIIYLVFRPKLPKYSVDQLRITQFNVSDNNTLSATFNVAITATNPNKKIGIYYEGGSHINALYMDTQLCEGSLPKFYQGHRNTTVLDLSLIGQAQDASALLSRIQEQLQQTNNIPLDLKVNQPVRVKLGKLKLFKVKFRVRCKLVVDNLGASNDISISSSICKFRLRL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00252 243 Coils Coil 169 189 - -
Spst6g00252 243 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 223 - -
Spst6g00252 243 Pfam Late embryogenesis abundant protein 115 218 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00252 Spst-Chr6 2582036 2582767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00252 47 243 EF-hand Containing Proteins AT5G21130 29.442 1.61e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00252 - - gmx:100789322 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00252 6 2582036 2582767 Spst6g00252 6 2582036 2582767 ECH
Spst6g00252 6 2582036 2582767 Spst8g00270 8 2364151 2364933 PCT