Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01412 ATGGTTGCGCCTTGTCCAACTTCCATGATGGTAAGAACCAAGAAAACTAAGGGTATGGGAATTCCGACGATCGACCTTTCGTTGGAAAGGTCGAAGCTGTCGGAACTAGTGGTGAAAGCATGTGAGGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGCCAAAGGAGGTAATTTCAAGATTGGAAGAGGAGGGAACGGAGTTCTTCTCCAAAACTTCCTCTGAAAAGAGTCAAGCAGGCCCTGCCAATCCTTTTGGATATGGCTGCAGAAATATTGGCCCCAATGGCGATATGGGTCACCTCGAGTATCTCCTCCTTCACACCAATCCTCTTTCCATATCTGAGAGATCAAAAACCATAGCCAACGACCCTACCAAGTTCAGTTGCGCCGTGAATGATTATATAGAAGCGGCTAAAGGACTAACATGTGAGATTCTTGATCTTGTGGCGGAGGGTTTGTGGGTCCAAGACAAGTTCTCTCTCAGCAACCTCATCAGAGACGTCCACAGCGACTCACTCCTCAGGATCAATCAGTACCCTCCCGTGGCATTAAAGGGCAACAAGAATTGGGACACGTCCAAACTTGAGGCACATCAACTTCAGAACCAAAATAATAATAATAACAACAACAACAACAACATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGATCCAACAACGTGGATGGCCTTCAGATTTCCACCCACGATGGGTTGTGGATCCCTGTCCCCCCTGACCCCAATGAGTTCTTCGTTATGGTTGGTGATGCCCTGCAGGTTTTGACAAATGGAAGGTTTGTAAGCGTGAGACACAGAGTATTGACCAACACAACAAAGGCCAGAATGTCAATGATGTACTTTGCAGCACCACCGCTAAATTGGTGGATCACTCCACTGCCGAAGATGGTGACACCCCACAATCCAAGTCAGTATAAGCCCTTCACGTGGGCCCAATACAAGCAAGCAGCATACTCTCTACGATTGGGAGACACTCGACTTGATCTCTTCAAGATCCAACGACAACAAGATACCCCTCTCGCATCTGCTTCTCCCTGA 1074 0.4749 MVAPCPTSMMVRTKKTKGMGIPTIDLSLERSKLSELVVKACEEYGFFKVVNHSVPKEVISRLEEEGTEFFSKTSSEKSQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSISERSKTIANDPTKFSCAVNDYIEAAKGLTCEILDLVAEGLWVQDKFSLSNLIRDVHSDSLLRINQYPPVALKGNKNWDTSKLEAHQLQNQNNNNNNNNNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFVSVRHRVLTNTTKARMSMMYFAAPPLNWWITPLPKMVTPHNPSQYKPFTWAQYKQAAYSLRLGDTRLDLFKIQRQQDTPLASASP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01412 357 Gene3D - 3 333 IPR027443 -
Spst7g01412 357 Pfam 2OG-Fe(II) oxygenase superfamily 199 295 IPR044861 -
Spst7g01412 357 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 328 - -
Spst7g01412 357 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Spst7g01412 357 FunFam Gibberellin 2-beta-dioxygenase 2 4 333 - -
Spst7g01412 357 PRINTS Isopenicillin N synthase signature 37 54 - -
Spst7g01412 357 PRINTS Isopenicillin N synthase signature 256 282 - -
Spst7g01412 357 PRINTS Isopenicillin N synthase signature 220 241 - -
Spst7g01412 357 SUPERFAMILY Clavaminate synthase-like 6 336 - -
Spst7g01412 357 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 304 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01412 Spst-Chr7 61037215 61041025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01412 12 344 Glycosyltransferase AT5G59530 25.797 6.17e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01412 K04125 - gmx:100779525 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01412 7 61037215 61041025 Spst7g01412 7 61037215 61041025 ECH
Spst1g02459 1 33256854 33259831 Spst7g01412 7 61037215 61041025 PCT