Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02459 ATGGTTGTGGCATCTCCAGCACCCATCAATAAAACAAAGGCAATGAGAATCCCAACCATCGACCTGTCCATGGAAAGGTCACAGTTGTCGCAAACTGTGGTGAAAGCGTGCGAGGATTACGGTTTCTTCAAAGTGGTTAACCACAATGTGCCCCATGAAGTTACTGCAAGATTGGAAGAGGAGTGTGCAGAGTTTTTTGCCAAACCCAGTCACCAGAAGCGTCGGGCTGGGCCTGCAAACCCTTTCGGTTATGGCTTCACAAACATTGGGCCCAATGGAGATATGGGTGACCTCGAGTATCTTCTACTTCATGCTGACCCTCTTTCTATCGCACAGAGATCCCCAACCATTGCTCACGATTCCACCAAGTTCAGTGTCGTCGTGAATGATTTTGTGGAAGTAGTAAAAGAAGTAACGTGCGAGATTCTAGATTTGGTGGTTGAGGGGTTGGGGGTCTCAGACAAGTTTGCTCTGAGCAGTCTCATCAGAGATGTTCACAGTGATTCTGTTCTGAGGATCAATCACTACCCTCCATTGAAGGTGAAGTCGAAGGGTAACAAGAATAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATCTTGACCATCATGCGCTCCAACGACGTGGGTGGCCTTCAAATTTACACCCGTGAGGGATTCTGGATTCCTGTCCCACCTGACCCCACTCAATTCTTTGTCATGGTTGGCGATGTCTTACAGGTTATGACAAATGGAAAGTTCATGAGCGTGAGGCACAGGGCATTAACCAACACATTGGAGGCAAGGATGTCAATGATGTACTTTGCAGCACCACCACTTGATTGGTGGATCACTCCTCTACCCAAGACACTGTCACCACCACAAAATCAAAGTCTATACAAACCCTTCACATGGGGCCAGTACAAGGAAGCAACATATACTTTACGCCTTGGAGATTCTCGACTTGATCTCTTCAAGGCCCAGCTAGATACCCATCTTCTATCTTCCTCTCCATCACAATTTCAATGA 1008 0.4732 MVVASPAPINKTKAMRIPTIDLSMERSQLSQTVVKACEDYGFFKVVNHNVPHEVTARLEEECAEFFAKPSHQKRRAGPANPFGYGFTNIGPNGDMGDLEYLLLHADPLSIAQRSPTIAHDSTKFSVVVNDFVEVVKEVTCEILDLVVEGLGVSDKFALSSLIRDVHSDSVLRINHYPPLKVKSKGNKNSIGFGAHSDPQILTIMRSNDVGGLQIYTREGFWIPVPPDPTQFFVMVGDVLQVMTNGKFMSVRHRALTNTLEARMSMMYFAAPPLDWWITPLPKTLSPPQNQSLYKPFTWGQYKEATYTLRLGDSRLDLFKAQLDTHLLSSSPSQFQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02459 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 271 IPR005123 -
Spst1g02459 335 SUPERFAMILY Clavaminate synthase-like 7 312 - -
Spst1g02459 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 17 90 IPR026992 -
Spst1g02459 335 Gene3D - 3 309 IPR027443 -
Spst1g02459 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 304 - -
Spst1g02459 335 FunFam Gibberellin 2-beta-dioxygenase 2 3 309 - -
Spst1g02459 335 Pfam 2OG-Fe(II) oxygenase superfamily 168 270 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02459 Spst-Chr1 33256854 33259831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02459 15 319 Glycosyltransferase AT5G59530 28.395 1.64e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02459 K04125 - gmx:100796690 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02459 1 33256854 33259831 Spst1g02459 1 33256854 33259831 ECH
Spst1g02459 1 33256854 33259831 Spst7g01412 7 61037215 61041025 PCT