Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01343 ATGACAATATTTGTCAATCTGAAAACAAGTGAAGTTCACAGTGCTTTGCAGAAGATGAGACACATGGAGGCTTCACTATCTAAAGTCTATCGTGCTTTCCCGGATTGCTCTAATATAGCTGCTAAGATCAATACAATGAAGCGTCTGATTGAAGAGCAAATCCATTCTCAGCGACATCAAGCAACATATCTTGTAAATCTTGCGGCAAGGACTGCCCCTAAAGGCATTCACTGTCTTTCTATGCAGTTGACTGCAGAATACTTTGCCTCGAGGCAGCATGAGAGAAAGCTTCCAAACAAAAATAATATTAATGATCCACAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGCAGTTGTTAACTCAACTATCTCTACTGCCAAGGAACAGGAGAAACTTGTTTTCCATGTATTGACCAAATCACTCAACTTACCAGCAATCTCAATGTGGTTCTTGATAAATCCGCCTGGCAAAGCTACAGTCCACATACAGAGCATAGACAAATTTGAATTGTTCTCCAAGCACAATTCCTTCCAGGAAAATAATTCCAGCGACCCAAGATACACTTCTGAATCGAACTACCTGCGTTTCTACCTTCCAGACATTTTTCCTGCTCTAGATAAGATTGTTCTATTTGACCATGATGTGGTGGTGCAACACGATCTCAGTGCACTATGGAATATTGATATGAAGGGAAACGTAATTGGAGCAGTTGGAACTTGTCAGGAAGGAAAAATCCCATTTTATAGGATTGATATGTTCATAAACTTCTCAGATCCATTAATTGGAAAGAGGTTCGATGTCGATGCTTGCACATGGGCATTTGGGATGAACTTGTTCGATTTGCAACAGTGGAGGAGACACAATTTAACTGCTGTCTATCACCATTATTTGCAATTGGGTTTGTGGAATATTGGAAGTCTACCTTTAGGCTGGCTAACTTTCTATAACAAGACAAAGTTGTTGGATAGACAATGGCATATTCTTGGCCTTGGTTATAGTTCAGATGTCGATCGAAATGAGATTGAGCGGGCTGCTGTTATACACTATGATGGGCTTAGGAAGCCGTGTTTCAACTCTACAATGGCAACCATCTCCGCTGCTACTACATACCCATCGATCACCCGCGCATGTCTTGTGGGAAAGCGGCCTCTTGGGGTCTCATCTCCCGTTCTTGGATTGCCAACAATGGGTAAGGTGGGAAGAGTGAGGTGCACCATGGAGGAAAAGCCTTCTGTGAAGGAAAGCAGCTCAAACCTGGGGATGGGGGCATCTTTGATAGCAGCTGCCTGTGCTGCAGCCATGTCAGGCCCAGCCATGGCCTTGGTGGATGAGAGACTGAGCACTGAAGGAACCGGGCTTCCCTTTGGGCTCAGCAACAATCTTCTTGGTTGGATCCTGTTGGGTGTCTTTGGTCTTATATGGGCTCTCTTCTTTCTCTACACTTCAACTCTTGAAGAAGATGAAGAGTCAGGATTGTCCCTTTAA 1503 0.4351 MTIFVNLKTSEVHSALQKMRHMEASLSKVYRAFPDCSNIAAKINTMKRLIEEQIHSQRHQATYLVNLAARTAPKGIHCLSMQLTAEYFASRQHERKLPNKNNINDPQLYHYAVFSDNVLACAAVVNSTISTAKEQEKLVFHVLTKSLNLPAISMWFLINPPGKATVHIQSIDKFELFSKHNSFQENNSSDPRYTSESNYLRFYLPDIFPALDKIVLFDHDVVVQHDLSALWNIDMKGNVIGAVGTCQEGKIPFYRIDMFINFSDPLIGKRFDVDACTWAFGMNLFDLQQWRRHNLTAVYHHYLQLGLWNIGSLPLGWLTFYNKTKLLDRQWHILGLGYSSDVDRNEIERAAVIHYDGLRKPCFNSTMATISAATTYPSITRACLVGKRPLGVSSPVLGLPTMGKVGRVRCTMEEKPSVKESSSNLGMGASLIAAACAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWALFFLYTSTLEEDEESGLSL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01343 500 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 361 IPR029044 -
Spst7g01343 500 Pfam Glycosyl transferase family 8 78 361 IPR002495 GO:0016757
Spst7g01343 500 Pfam Photosystem II reaction centre W protein (PsbW) 367 500 IPR009806 GO:0009507|GO:0009523|GO:0015979
Spst7g01343 500 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 111 374 IPR029044 -
Spst7g01343 500 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 13 370 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01343 Spst-Chr7 51025776 51030600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01343 15 364 Glycosyltransferase AT1G06780 54.494 5.76e-137 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01343 K13648 - gmx:100819255 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01343 7 51025776 51030600 Spst7g01343 7 51025776 51030600 ECH
Spst1g03137 1 39922690 39923371 Spst7g01343 7 51025776 51030600 PCT