Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01272 ATGTATGCTAAGGAGTCTATAAATCTAATATTAATTTGTAGGCTAAACTGTCCTGAGGCAGCCATGAGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAGAGACTTGTGTATGAGGGGTGGATCTTGTATGATTCAGGTCATTACGAGGAAGGCCTCCAAAAAGCTGAAGAGTCTATTACTATTAAAAGGTCTTTTGAGGCCTTCTTCCTAAAAGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCATGTTCTTCCACTGTCATTTCACTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCCCTGAACAATCTTGGAAGTGTTTATGTTGATTGCGGAAAACTAGACGCAGCAGAAGATTGCTATATCAAGGCCCTTAAAATCCAGCACACGCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTCAGAAATGATAATAAGGCTGCTGCGTACAAAGAAATGACCAATCTTATTGAGAAGGCAAGAAACAATGCTTCAGCGTATGAGAAGAGGTCTGAGTATGGTGATCGTGAACTCACAAACGCTGATCTGGAGATGGTCACTAGACTAGATCCACTTCGGGTGTATCCTTACAGATATCGAGCAGCAGTTTTGATGGACAACCATAAGGAAGAGGAAGCCATTGCTGAACTCTCCAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACACAAGGGAGATGTTTTAGGAGCGTTAAGAGATTGTCGTGCTGCACTGTCTGTGGACCCAAATCATCAAAAAATGTTAGAACTTCACTGTCGTGTTAATAGTCACGAGCCATGA 867 0.4314 MYAKESINLILICRLNCPEAAMRSLQLAWQHASSEHERLVYEGWILYDSGHYEEGLQKAEESITIKRSFEAFFLKAYALADSSVDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLDAAEDCYIKALKIQHTRAHQGLARVHFLRNDNKAAAYKEMTNLIEKARNNASAYEKRSEYGDRELTNADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQKMLELHCRVNSHEP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01272 288 PANTHER ETO1-RELATED 10 287 IPR044631 GO:0010105
Spst7g01272 288 ProSiteProfiles TPR repeat profile. 110 143 IPR019734 GO:0005515
Spst7g01272 288 Gene3D Tetratricopeptide repeat domain 11 171 IPR011990 GO:0005515
Spst7g01272 288 SMART tpr_5 240 273 IPR019734 GO:0005515
Spst7g01272 288 SMART tpr_5 110 143 IPR019734 GO:0005515
Spst7g01272 288 SMART tpr_5 36 69 IPR019734 GO:0005515
Spst7g01272 288 Coils Coil 156 183 - -
Spst7g01272 288 Gene3D Tetratricopeptide repeat domain 172 286 IPR011990 GO:0005515
Spst7g01272 288 Pfam Tetratricopeptide repeat 111 141 IPR001440 GO:0005515
Spst7g01272 288 SUPERFAMILY TPR-like 94 281 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01272 Spst-Chr7 42343881 42345024 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01272 - - gmx:100785039 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03166 1 40161223 40170897 Spst7g01272 7 42343881 42345024 PCT