Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03166 ATGAGACGCACCTTCTCATCACCTCAAATCCACTCAAATGAGCAGAAGTTAAAAGAAAAAATTAATTTGTATGGTCTGTCTTCAGGGAAGGAAAGTCAGATACTTTCCCTATCACCAAAAAGAAAAGGCACAAAAAAAATGGAAAGGTGTGGTGCTGTTGTGGAGATCCGGGAGTTGTTTCGTCTCTTATGCCCCATGAGGAGTTTCTTCCCCTCAGAATCCTGTAAAGAGGCGCACCCAAATGCTTTGAATCCTCAGTCTTGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCACACCCTTCATCTGCCTCAATAGAATCATTGGTCAAGGTCCCTCAGCCAGCTATCCTACCTTTCTTTAAGCCTGCTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAGCTTGAGTCTTGTCCTCCACAAGAGCGGTCGAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGCGAAGTTAAACTGATGCGTAGAAGCCTTCAGGGAGCCTGGCAGAAAGCCAACACTGTTCATGAAAAGATTATATTTGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAACTAATAGCCGACTTGCTTGCCAATTGTGGTAAATGTGCGAAAGAGTTTGCGCCTGTAGATATAGCGTCTCATCTTCCATTTGATATAAATGCAAGTTCTGCGGGGAGAATGACCAATGAGAACCTCATTTCTCAAAATGTCACTTTTACTATTGGTGATGAAGATATAGTCTGTGATAGACAAAAAATTTCAGAACTTTCGGCACCATTTCATGCTATGCTAAAGGGTTATTTCAGTGAATCACGCTGTGAGACTATAGATTTATCTGAAAATAATATCTCTCCTTTAGGTATGAAGGCAATCAATGATTTCAGTTTGACTGGCAGTTTAATTGAGGTCTCTCCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAACAAGTATTGTTGTGAAAGACTTAAAGATGCTTGCGATAGAAGACTTGCCTCTTTAGTTTCCTCCAAAGAAGATGCTGTAGAGCTCATGGAATGTGCTCTTGATGAGGATTCAACTGTCCTTGCTGCATCCTGTTTACAAGTCCTTTTGCGTGATCTTCCAAACTGTTTGAATGACAATCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCGGCAGCTAGCAGTCATGGTTGGACCTGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAACTCTAGTTCAGATAAAACAGCACATATCATGGAACGTTTAGTTGAGTTTGCTGAGAATGACAACCAGAGACTGCTGGCTTTACATCAATTGGGATGTGTAAGACTCTTACGGAAAGAATATGATGAAGCACGTCTTCTTTTTGAAGGGGCTGTAAATGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGACTAAACTATATAAAGGGTGACAGACTTTTATCTTATGAGCAGTTCAGCTCAGTGATTTCGTCTGTTACTCCACTTGGATGGATGTATCAGGAAAGGTCACTATACTGTGACAGTGACAAAAGGTGGGATAACCTTGAGAAAGCAAGTAATTTGGATCCTACTCTTGCATATCCCTACATGTACAGGGCTGCCTCTTTAATGAGGACGCAGAATGCTCAAGCTGCACTAGCAGAAATCAATCGGATTCTTGGGTTCAAACTTTCACTAGAATGCTTAGAAATACGATTTTTTATCCATCTGGCTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTCTACGATCAGATTATAGAATGTTTGAGGGACGTGTTGCTGCATCCCAACTCTGTACACTTGTACGTGAGCATGTTGAACGTTGGACAACTGCTGATTGTTGGGCACGGTTATATGACTGTTGGTCTGCAGTTGATGATATTGGGTCTCTTTCTGTTATATATCAGATGCTTGAATCTGACGCGGCAAAAGGTATTCTGTACTTCAGACAGTCATTACTTCTCTTAAGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTACAGTTAGCTCGGCAGCATGCATCTACTGAGCATGAACGACTTGTTTATGAGGGGTGGATCTTATATGATACAGGTCATTACGAGGAAGGGCTCCGGAAAGCTGAAGAGTCTATCAGTATCAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTATAGATCCATCAAGTTCACCTACTGTTATCTCTCTTCTGGAAGATTCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTATGTTGACTGCGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATCCGTCACACCCGAGCTCATCATGGTCTTGCTCGTGTTCATTGTCTCAAAAATGACAAGGCTGCTGCTTATATGGAAATGACCGAACTTATCAAGAAGGCAAAAAACAATGCATCGGCTTATGAGAAGAGGTCTGAGTATTGTGATCGTGAACAAGCAAAGGCAGATCTGGAGATGGTCACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATATCGTGCTGCAGGTTGGTGTTTTACCTATCTGACTAAGCTCTCTGGACTTGTTCTGCTTGAGTAG 2688 0.4152 MRRTFSSPQIHSNEQKLKEKINLYGLSSGKESQILSLSPKRKGTKKMERCGAVVEIRELFRLLCPMRSFFPSESCKEAHPNALNPQSWLQIERGKLPKLSSHPSSASIESLVKVPQPAILPFFKPADYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQKANTVHEKIIFGAWLKYEKQEEELIADLLANCGKCAKEFAPVDIASHLPFDINASSAGRMTNENLISQNVTFTIGDEDIVCDRQKISELSAPFHAMLKGYFSESRCETIDLSENNISPLGMKAINDFSLTGSLIEVSPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMECALDEDSTVLAASCLQVLLRDLPNCLNDNRVVEIFVHANKRQLAVMVGPGIFALFCFLSEVSMNLNSSSDKTAHIMERLVEFAENDNQRLLALHQLGCVRLLRKEYDEARLLFEGAVNAGHIYSVAGLARLNYIKGDRLLSYEQFSSVISSVTPLGWMYQERSLYCDSDKRWDNLEKASNLDPTLAYPYMYRAASLMRTQNAQAALAEINRILGFKLSLECLEIRFFIHLALEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMRSLQLARQHASTEHERLVYEGWILYDTGHYEEGLRKAEESISIKRSFEAFFLKAYALADSSIDPSSSPTVISLLEDSLKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKADLEMVTRLDPLRVYPYRYRAAGWCFTYLTKLSGLVLLE 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03166 895 SMART tpr_5 700 733 IPR019734 GO:0005515
Spst1g03166 895 SMART tpr_5 666 699 IPR019734 GO:0005515
Spst1g03166 895 SMART tpr_5 774 807 IPR019734 GO:0005515
Spst1g03166 895 SUPERFAMILY POZ domain 244 340 IPR011333 -
Spst1g03166 895 Gene3D Tetratricopeptide repeat domain 651 881 IPR011990 GO:0005515
Spst1g03166 895 Gene3D Tetratricopeptide repeat domain 419 642 IPR011990 GO:0005515
Spst1g03166 895 SUPERFAMILY TPR-like 440 608 IPR011990 GO:0005515
Spst1g03166 895 Gene3D Potassium Channel Kv1.1; Chain A 235 384 IPR011333 -
Spst1g03166 895 SMART BTB_4 244 344 IPR000210 GO:0005515
Spst1g03166 895 PANTHER ETO1-RELATED 66 878 IPR044631 GO:0010105
Spst1g03166 895 Coils Coil 826 846 - -
Spst1g03166 895 SUPERFAMILY HCP-like 669 881 - -
Spst1g03166 895 ProSiteProfiles TPR repeat profile. 774 807 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03166 Spst-Chr1 40161223 40170897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03166 - - gmx:100793740 1504.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03166 1 40161223 40170897 Spst7g01272 7 42343881 42345024 PCT