Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01268 ATGAATTGTGGCCGAAATGAGTTCCACAAAACCAGAACTGGTACTCATTTGCCAGAGAGCCCAAGAGTACCGATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCTCTTGAGGTCTCTAAAGCCCTTGCACCCCCACCACCTCCTTCTTCTTACATACCTTCCAAGCCTCCTATTATACCCTCTTGTGTCACCAACTCCATTTCCGCGGAAACTTCTTCTGCTCAGTCAGAGGAATTCTCAACAACCATGTGCAGCAACCAGTTCTCTTTTGCTTCCTCCTCGACCTCACAGCTCGTCCTTGACCGCATAATGTCACAGTCAACTAGAGAGGAAGTGTCGCCATTAACGTCAGGTAGACTGTCTCACAGCAGTGAACCTTTGAATGGCGGTGCTTCTCTAACCGGCACGGACAGTCCACCATTCTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAACTCCATTCATCCCTTATTCATTGGTGGACGAGGCATGAGTGGTGCTACAGGTACTGGCACTCCTTGTTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGAGAGAAAAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAACTGCATGCTGCAATTTCTGTTGCTGCCGTGGCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGGCAGCCACATCTGCGGGTACCAAGGATGAGAAGATGGCCGTGTCTGTGGCTTCTGCGGCCACGTTAGTTGCTGCTCAGTGTGTAGAGGCAGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTGCTGTGGTGAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACGCTTACAGCTGCAGCTGCCACCGCTCTACGTGGGGCAGCGACCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATCACTGCAGTGACTCCATTAGAGAGAGGCGTAGGGATTGGAATTTGTGGTAAAAGCAACAACAGTAATTCTAGCACCAGTGATAGTGGGGAGATTACGAATGGTGACAATTTTTTGGGTGCCTGCAACCAAGAGCTCCTTGCTAGAGGCACTGCACTACTCAAACGGACCCGTAAAGGTAATTTCAGTAACTAA 1134 0.4921 MNCGRNEFHKTRTGTHLPESPRVPMEFLSRSWSASALEVSKALAPPPPPSSYIPSKPPIIPSCVTNSISAETSSAQSEEFSTTMCSNQFSFASSSTSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPFSPSDEFDDVVKFFRANNSIHPLFIGGRGMSGATGTGTPCSGPKTVGRWLKERKEKKKEENRTHNAQLHAAISVAAVAAAVAAVTAATAATSAGTKDEKMAVSVASAATLVAAQCVEAAEAMGAERDHLAAVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNITAVTPLERGVGIGICGKSNNSNSSTSDSGEITNGDNFLGACNQELLARGTALLKRTRKGNFSN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01268 377 MobiDBLite consensus disorder prediction 110 142 - -
Spst7g01268 377 PANTHER EXPRESSED PROTEIN 12 375 IPR040269 -
Spst7g01268 377 MobiDBLite consensus disorder prediction 1 22 - -
Spst7g01268 377 Pfam Auxin canalisation 18 322 IPR008546 -
Spst7g01268 377 MobiDBLite consensus disorder prediction 110 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01268 Spst-Chr7 42042032 42045611 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01268 - - gmx:100782024 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01268 7 42042032 42045611 Spst7g01268 7 42042032 42045611 ECH
Spst1g03168 1 40176239 40179733 Spst7g01268 7 42042032 42045611 PCT