Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01262 ATGGCGACTTTGTCTCATGCAAACAATAGGAGAATGTATTCATGGTGGTGGGACAGCCATATAAGCCCCAAAAACTCAAAATGGCTCCAGGAAAATCTGACAGATATGGATGTCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTATTATAAAAAACGCCCGGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATATCGGGCATTGGCTGAGAGATATGATCATGCAACAGGAGTGATCCGCCATGCCCATAGGACCATGGCGGAGGCATTTCCAAATCAAGTTCCTATGATGCTAACAGATGATTTACCTACAGTTTCTCCTCCGGAGACAGAGCCACACACTCCAGAAACGCGCCACCCTTCACGTGCGTTTCTAGATCCAGATGAACCACAAAAGGAGTCTTCTGCTCACTTCCATGTTATAAAAAAAAATGGTGGTTATACAGGCGAACCTGACTCTTCTTTGAGCAAAACAGGTTTGAAACAGCTCAATGATCTCTACATCCCTGGAGAACAGGAAAATCTTACACAGTTTTCAGAAAGGCAAGCTAGAAGGGGGCTCAATTTTTTCGAGACACAGGAGAGTAGTGAGCTAAACAATGGGAGCAACAGTACTAGGTCTCAAGTCTTTGAGTCTGAACGTGTGACAAAAGCAGAGACAGAAATTTTGGCCTTGAAAAAAGCCATTGCCAAATTAGAAGATGAAAAGGAAGCTGGCTTGCTTCAGTATCAACAGTGTCTAGAGAAGTTGTCAAATCTCCAGTTAGAAGTGTTAAGTGCACAAGAGAATTCTCAAAGACTTGATGAGCGAGCAAGTAAAGCTGAAGCTGAAGTTCAAGCCTTGAAGGAAGCCCAAATTAAATTACTGGCTGAAACTGAAGATAGTCTTCATAAGTATCAGGATTGCCTGGAGAAAATAGCAAATCTAGAGAAAAATATTTCTTTTGCACAGACGGAAGCAGGAGAACTTAATGAAAGAGCTACCAGAGCTGAAACTGAAACTGAGTCCCTAAAGCATGACCTTGCCAGAGTAGAAGCTGAAAAGGAAGCTATCCTTGTTCAATATAAACAGTGCTCGGAGACATTATCCAAAGTGGAGGAGAGATTAGAAGAAGCTAAGGAAAGTTCAAGAAGGACTAAAGAGCAAGCCAATATAGCTGAAAATGAAATTGAGGCTTTGAAAAAAGAAGTTACTAAACTTAATGAAGACAAGGAAGAAGCTGCTCTCCGTTATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAGTATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGCTAAATTCCAAGATAGATGATGGTGTTGAAAAATTAGAGAGTTCTGAGCAGAAGTGTCTTCTCTTGGAGACATCAAATGACACTCTGCAGTCTGAATTACAATCTTTGGCCCAACAAATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAAGGAATTGAGTAGACTTTGGGGTTGCATACAGGAGGAGAGATTGCGCTTCATTGAGGCAGAAACTGCTTTCCAAACTCTTCAGCAGTTACATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAACTTCACAGTAAAGTGGAAATACTGGGGAATGTGGAATCACGTAAGAAGGCTCTAGAGGATGAAGTACACAGGGTCAGTGAGGAAAACAAAATTTTAAATGAGGTCAAAATATCTTCATCTTTGTCAATAAAAAATTTGCAAGATGAGATTTTGAATTTGAGGGAGACAATAGAGAAACTTGAACAGGAGGTGGAGCTTCGAACTGATGAAAGGAATGCTCTTCAGCAAGAAATTTACTGTCTTAAGGAGGAGCTTAATGATTTGAATAAAAAACATGAAGCCATGATGGAGGAGGTCAGGTCAACTGACTTAGATCCACAGTGCTTTGGATCATCTGTAAAAGAATTGCAAGAGGAAAACTTAAAGCTGATGGAAACATGTGAGGCTGACAGAGGAGAAAAAGAAGCTCTCCTGGTAAAATTGGAAACCATGGAGAAACTTCTGGAGAAAAACATGGTTTTGGAGAATTCCCTTTCAGACTTGAATGCGGAGCTGGATAGTGTCAGAGGAAAGGTAAATGCGTTGGAAGAAACGTGCCAATCTCTACAAGTGGAGAAATCCAATCTTGCTGCTGAGAAGGCCACTTTGTTTTCTCAGTTGCAATCTACAACTGAAAAGCTGGAGGAGCTCTCAGAAAAGAGCAACCTCTTGGAAAATTCATTGTTTGATGTGAATGCTGAACTTGATGGGTTAAGGGTGAAATCAAAGATATTAGAAGACACATGCCAGTCACTTGACCATGAGAAGTCCAGTATCTTTCAAGAGAAAGAAACTTTAGTTTCACAGATGAACATAACTCATCAAACACTGAAAGATCTTGAGAAATTTCACACTGAGTTGGAGTCAAAGCATTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTCAAAAGGTAGAAGAGCTTCTAGTTTCCCTATATTCTGAGAGGGAAGAACATTCCAGAGTTTTGAAATTAAGTGAAGAGGATTTGGCTTCGAAGGAATTGCAAATTCTTAGTCTACAAGAAGATGCCAATAGCAAGAAAAAGGAATATGACGAGGAACTGGACAGAGCTATACATGCTCAAATTGAAATTTTTATCTTACAGCAATGTGTTGATGATATGGAAAAAAAGAACTTCTCCATTCTGGTGGAGTGTCAAAGACTTTTGGAGGCTTCCAAATTGTCAAACAGAATGATATCTAAATTGGAGACTGAAAATGTTCAAAAGCAGGTTGATGTGAATTCTCTGTCTGAGAAAATTAAAATACTAAGGATTGGGTTGATTCAGGTGTTGAAGACTCTTGACAATAACAGTGGGCATATTTGTGAAGATATGCTTGAAGAAGATCAAATGCTTCTGACCCACATATATGGAAAACTTCAGGAGAGGCAGAAATCTTTTGATACAATTTTCAATGAAAGCCAAAAAATGGCCATTGAGAATTCAATTCTGATTACATTCCTTGAGCAGTTGAAACTAAAGGTAGAAATTCTTGTGACACAAAGAGATGCCCTTGATGAGCAGTTCAATATCCAGTCTAAGCAGTTCTTGGCATTGCAAGTAGATGTCCAAAAGATATTGGAGAAGAACCAAGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAGAGAATGGAAGTAATGACAACTGAAATAGACAACCTACAGAAGAAGCTGATTGACATGCAAAAGAGTCACAACAATTTACAGGAGGATAGTTGCAAGATATTGGAAGAGAAAAAGTCCTTGATGAGAAGTTTTCTAGATCTGGGTGAAGTGAAAAGTAATTTGGAAGAAGAAATATGTTTCATGATCCATGAGACAATGGCTCAATCTAATATTTCCCTGATTTATGAGAATGTTATATTTGAAAAGCTCCTGGAACTTAAAGAGCTACGTGAGGATCTTGATAAACATCGTTTAGCAAATAATGACCTTGAGGAGAAATTAAAAGTAATGTCCGGCAAGTTAGAAAATGCAGAAATGGAAAATTCGCATCTTAAAGAGTCATTTGTAAAGTCAATTGTTGACCAACATTTAGTTGAATCTATGAATGATGAATTGAGTTTTCAGATTAGGGATGAAAGGGAAATATTGCATCAGAAGGAAAATGAGCTCTTGGAAGCAGTCGAGATGTTTCGTGCTTTACATACTGAGAAGGTGGGCAAGTTAGAGAATGCAGAAATGGAAAATTCACATCTTAAGGACTCATTTGTAAAGTCAATTGTTGAACAACATTTAGTTGAATCTATCAACGATGAATTGAGCTTTCAGATTAGGGATGTAAGGGAAATGTTGCATCAGAAGGAAAATGAGCTCTTGGAAGCAGCCGAGATTTTTCGTGCTTTACATACTGAGAAGGTGGGCAAGTTAGAGAATGCAGAAATGGAAAATTCACATCTTAAGGACTCATTTGTAAAGTCAATTGTTGAACAACATTTAGTTGAATCTATCAATGATGAATTGAACTTTCAGATTAGGGATGAAAGGGAAATGTTGCATCAGAAAGAAAATGAGCTCTTGGAAGCAGCTGAGATGTTTCATGTTGTACATTCTGAGAGAACAGAATTGCAAAGAATGGTGGAAGATCTCAAGAATAAATATGATGAAGCAAGGGTGATGCTCGAAGAACAGGCTAATCAAATTTTGAAATTGTCCTCAGACAAGGATCATCAAAATGAAGAGCTAATATGCCTGTGTGAAGTGAATCAGAAATTGGAGTCTGAAATGGGGTACCTACGGCAAGAGCTTGGAGAAACTAAACTGAAGGAAAAGAAGCTGAGTTATGAAGTACTTAAGGGAACAAATGAGATTGAACTATGGGAAATTCAGGCTTCAACACTCTTTGCTGAAATGCATATTTCGGCTGTCAACGAAACAATATTTGAAGCAAAGGTCTGTGAGCTAGCTAATGCTTGTGAGAATCTTGAACACAGAAACTACTCCAAAGAAATGGAAAGCGAGCATCTGAAAGAAAGAGTTAACAAGTTGGAAGTTGAAAATGGAAGACTATCTGGCCAATTAGCTGCATATGTTCCCGCTGTCAGTGCTTTGAATGATTGTATAACAAGTCTGGAGATGCAGACTCTTGTACATGCAAAACCTGATGACTGTGAAGAATCGAAGGTTAAAAATTTGATGAATAATGAATTCACTGAAAATGGTCAACAAGATAAGACTGTAATGGCACCAGATTCACTCCCTGAGTTCCAAGACATGCAGAGAAGGATCAATGCAATTGCAGTGGCAGTAAAGCAGTTAAATGAAAGTTTCAAACTCAAGAATGAAACGAGAGAGATTCAAGAGTTAAAATATGGAATTATCCGGCAAGAAGACAATATTCAGGCTAGCAAGCATGTTACTCAAGATCAAGCAAAGTCAGATAACCCGGTTACCGAGATTGAAGTTTTGCCAAAAGACATCATGCTAGATCAAATATCTGAATGTTCATCGTATGGAATAAGTAGGAGGAGAGAAATTCTTGAGGCCGATGATCAGATGCTTGAGTTGTGGGAAACAGAAGATAAGGATGGAACTATCGGAAAGCAAGTGGAAAAGACACAGAGGATGGCTGCTGAAGCTGCTGGCAATCATCAAAGAGGAGCAACCAAGGAACCCAAAAACAAATATCCTTCAAAAGATTCCTTGGTGGAAAAAGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGATTGACACTGCCACGAGAAGAAGGGAACCAGAGGAAGATTTTAGAGAGACTCGATTCTGATGCACAGAAGTTGACAAACCTTCAAATCACCATACAAGATTTGATGAAGAAGGTAGAGGCTAATGAGAAGAACACAAAGGGAAAAGGTGTTGAGTTTGATGAGGTGAAAGGGCAGCTTGAAGCATCCCAAGAGACCATCACAAAGTTGTTTGACGCCAACCGCAAGTTGATGAAGAATGTGGAAGAGGGTACCTTGTCTTCTATCGGGAAGGGTGCAGCAGAGTCAGATGAAAGTGGAAGTGTCAGCAGGAGAGTCTCAGAACAGGCACGGAGAGAATCAGAAAAGATAGGACAACTGCATTTGGAGGTGCAGAGACTTCAGTTTCTACTGCTTAAACTTGGTGATGGAAAAGAAAGCAAAGAGAAAACAAAACTGACTGATCGAAGTCCAAGAGTTCTTTTGAGAGATTATCTCTATGGTGGGACGAGAACCAACAACCAAAAGAAGAAAAAGCTACCTTTTTGTTCATGTGTGCGACCTCCCACCAAGGGAGATTGA 5859 0.3941 MATLSHANNRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQVPMMLTDDLPTVSPPETEPHTPETRHPSRAFLDPDEPQKESSAHFHVIKKNGGYTGEPDSSLSKTGLKQLNDLYIPGEQENLTQFSERQARRGLNFFETQESSELNNGSNSTRSQVFESERVTKAETEILALKKAIAKLEDEKEAGLLQYQQCLEKLSNLQLEVLSAQENSQRLDERASKAEAEVQALKEAQIKLLAETEDSLHKYQDCLEKIANLEKNISFAQTEAGELNERATRAETETESLKHDLARVEAEKEAILVQYKQCSETLSKVEERLEEAKESSRRTKEQANIAENEIEALKKEVTKLNEDKEEAALRYQQCLEIISSLEYKLSCAEEEVRRLNSKIDDGVEKLESSEQKCLLLETSNDTLQSELQSLAQQMGSQSEELNEKQKELSRLWGCIQEERLRFIEAETAFQTLQQLHSQSQEELRSLAAELHSKVEILGNVESRKKALEDEVHRVSEENKILNEVKISSSLSIKNLQDEILNLRETIEKLEQEVELRTDERNALQQEIYCLKEELNDLNKKHEAMMEEVRSTDLDPQCFGSSVKELQEENLKLMETCEADRGEKEALLVKLETMEKLLEKNMVLENSLSDLNAELDSVRGKVNALEETCQSLQVEKSNLAAEKATLFSQLQSTTEKLEELSEKSNLLENSLFDVNAELDGLRVKSKILEDTCQSLDHEKSSIFQEKETLVSQMNITHQTLKDLEKFHTELESKHLELKGERESALQKVEELLVSLYSEREEHSRVLKLSEEDLASKELQILSLQEDANSKKKEYDEELDRAIHAQIEIFILQQCVDDMEKKNFSILVECQRLLEASKLSNRMISKLETENVQKQVDVNSLSEKIKILRIGLIQVLKTLDNNSGHICEDMLEEDQMLLTHIYGKLQERQKSFDTIFNESQKMAIENSILITFLEQLKLKVEILVTQRDALDEQFNIQSKQFLALQVDVQKILEKNQELKLTISKGEERMEVMTTEIDNLQKKLIDMQKSHNNLQEDSCKILEEKKSLMRSFLDLGEVKSNLEEEICFMIHETMAQSNISLIYENVIFEKLLELKELREDLDKHRLANNDLEEKLKVMSGKLENAEMENSHLKESFVKSIVDQHLVESMNDELSFQIRDEREILHQKENELLEAVEMFRALHTEKVGKLENAEMENSHLKDSFVKSIVEQHLVESINDELSFQIRDVREMLHQKENELLEAAEIFRALHTEKVGKLENAEMENSHLKDSFVKSIVEQHLVESINDELNFQIRDEREMLHQKENELLEAAEMFHVVHSERTELQRMVEDLKNKYDEARVMLEEQANQILKLSSDKDHQNEELICLCEVNQKLESEMGYLRQELGETKLKEKKLSYEVLKGTNEIELWEIQASTLFAEMHISAVNETIFEAKVCELANACENLEHRNYSKEMESEHLKERVNKLEVENGRLSGQLAAYVPAVSALNDCITSLEMQTLVHAKPDDCEESKVKNLMNNEFTENGQQDKTVMAPDSLPEFQDMQRRINAIAVAVKQLNESFKLKNETREIQELKYGIIRQEDNIQASKHVTQDQAKSDNPVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLELWETEDKDGTIGKQVEKTQRMAAEAAGNHQRGATKEPKNKYPSKDSLVEKELSVDKLEISRRLTLPREEGNQRKILERLDSDAQKLTNLQITIQDLMKKVEANEKNTKGKGVEFDEVKGQLEASQETITKLFDANRKLMKNVEEGTLSSIGKGAAESDESGSVSRRVSEQARRESEKIGQLHLEVQRLQFLLLKLGDGKESKEKTKLTDRSPRVLLRDYLYGGTRTNNQKKKKLPFCSCVRPPTKGD 1952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01262 1952 Coils Coil 1165 1206 - -
Spst7g01262 1952 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Spst7g01262 1952 MobiDBLite consensus disorder prediction 206 225 - -
Spst7g01262 1952 SUPERFAMILY Tropomyosin 405 645 - -
Spst7g01262 1952 Coils Coil 1791 1811 - -
Spst7g01262 1952 Coils Coil 687 770 - -
Spst7g01262 1952 Coils Coil 1060 1108 - -
Spst7g01262 1952 Gene3D - 683 861 - -
Spst7g01262 1952 Coils Coil 432 466 - -
Spst7g01262 1952 Coils Coil 257 305 - -
Spst7g01262 1952 MobiDBLite consensus disorder prediction 1730 1750 - -
Spst7g01262 1952 Coils Coil 313 361 - -
Spst7g01262 1952 MobiDBLite consensus disorder prediction 1736 1750 - -
Spst7g01262 1952 Coils Coil 1025 1045 - -
Spst7g01262 1952 MobiDBLite consensus disorder prediction 126 149 - -
Spst7g01262 1952 Coils Coil 229 249 - -
Spst7g01262 1952 Coils Coil 551 578 - -
Spst7g01262 1952 Coils Coil 656 676 - -
Spst7g01262 1952 Coils Coil 523 543 - -
Spst7g01262 1952 Coils Coil 474 501 - -
Spst7g01262 1952 Coils Coil 1355 1382 - -
Spst7g01262 1952 Coils Coil 1390 1431 - -
Spst7g01262 1952 Coils Coil 1288 1315 - -
Spst7g01262 1952 SUPERFAMILY Myosin rod fragments 698 806 - -
Spst7g01262 1952 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Spst7g01262 1952 PANTHER PROTEIN NETWORKED 4A 393 1053 - -
Spst7g01262 1952 Coils Coil 1221 1241 - -
Spst7g01262 1952 MobiDBLite consensus disorder prediction 1854 1876 - -
Spst7g01262 1952 Coils Coil 936 956 - -
Spst7g01262 1952 Coils Coil 1523 1543 - -
Spst7g01262 1952 Coils Coil 586 645 - -
Spst7g01262 1952 Coils Coil 369 424 - -
Spst7g01262 1952 Coils Coil 859 897 - -
Spst7g01262 1952 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01262 Spst-Chr7 41900296 41907038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01262 - - gmx:100782563 2923.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01262 7 41900296 41907038 Spst7g01262 7 41900296 41907038 ECH
Spst1g03176 1 40227551 40233064 Spst7g01262 7 41900296 41907038 PCT