Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03176 ATGGATTCCAAGGTGAAGCAAATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGGGCAGAGATGTATTATAAGAAACGGCCAGAGCTTATGAAATTAGTTGAAGAGTTTTATCGTGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATTCGTCAGGCCCATCGTACCATGGCTGAAGCATTTCCTAATCAAGTCCCTCCTGCACCAGCAGATGATTCACCTGGAGTTTCTTACATGGAGACTGAGCCACATACACCAGAGGCACTCAGCTTTTCCCATTCATTTCTTGACTCAGTTGAATTGCAAAAGGATGCTTCACCTAGTTTCCATGCCATCAAAAGAAATGGATCTTATACTGATGAAACTGATTGTGGTTTAAGCAGAAAGGGTTTGAAACAGCTCAATGATCTATTCATGTCAGGAGAACCTGTAAGTCATGCAAAGTCTTCAGAAGGGCGGGTTCGAAGGGGGCTCAATTTTCATGACACAGAACAGATTAATGAGCAAGACAATGGAAGCCAAGATATCAGGACTTTAATCTTATCCGAGTCTGAACGGATGACAAAAGCTGAGACGGAAATTTTGGCCTTAAAGAAAGCCCTGGCTAACTTAGAAAGTGAAAAGGAGGCTGGCTTGCTTCAGTATCAGCAGAGTTTGGAGAGATTGTCTAATCTGGAGTCAGAAATGTCTCGTGCAAGAGAGAATTCTCAAGGTCTTAATGAACGAGCAAACAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCCCTTGATGAATTACAGGCTGAAAGAGAAGTTAGTCTTCTTGAGTACCAGCAATGCTTGGAGAAAATATATCATCTGGAGAAAAATATTTCATCTGCTCAAAAGGATGTAGGAGAACTTAATGAACGAGCTACCAGAGCTGAAACTGAATCTGAATCCTTAAAGCAAGACCTTGCTAGAGTAGAAGCTCAAAAAGAAGTTGCCCTTGTTCAATATAACCAATCCTTAGAGTTGTTGTCAAAACTAGAGGAGAGACTAGTACAAGCTGAAGAGAATAAAAAGAGAATTAATGAACAAGCTAATGCAGCAAAAATTGAAATTGATAGCATGAAATTAGAAATTGCTAAACTTACTGAAGAGAAGGAAGATGCAGCTCATCGTTATCAACAATGCATGGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTGCCCTAGAGGAGGTGCATAAGCTAAAGTGTAAGATACATGATGGGGTTGAAAAGTTAAATAGTTCTGAACAGAAGTGTGTGCTCTTGGAAACATCTAATCAGACTTTGCAATCTGAATTACAGTCTTTGGTACAGAAGTTGGGATCTCAAAATGAAGAACTTAGTGAGAAACACAAAGAATTGGGTAGACTCTGGACTTGCATACAAGAGGAGAGACTGAGATTCATCGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAGGAAGAGCTAAGATCTCTAGCCACTGAGCTTCATGGTAAGGCTGAAATTCTGGAGAATATGGAATCCCGTAAGCAGGCTTTAGAGGATGAAGCACACAAGGCCAGAGAGGAGAACAAAACTCTCAATGAGCTCAAATTATCTTCATCTTTGTCTATAAAAAGAATGCAGGATGAGATATTAAATCTGAGGGAGATAATAAAGAAACTTGAGCTGGAGGTTGGAATACAAGTAGATGAAAGAAATGCTCTCCAGCAAGAAATTTACTGTCTTAAAGAAGAGCTTAATGATTTGAAGAAAATACATGAATCCATGGTGGAGGATGTCAGATCAACTGACTTAGAACTACAGTGCTTTGCCTCATCTGTGAAGAACTTGCAAGATGAGAACTCAAAGTTAAAGGAAAGAAGTGAAACCTACAAAGATGAGAAAGCAGCTCTAAAGGAAAAAGTGGAGATCATGGAGACGCTTTTGGAGAAGAATGCTGTTCTGGAGAGGTCTCTTTTAGATTTGACTGTTGAGCTTGAGAGTGCTCGAGGAAAGGTAAAGATATTGGAAGAAACTTGCGAATCTTTGCTTGGGGAGAAATCCACTCTTGCTGCTGAGAAAGCCACCTTGTTTTCTCAGTTACAAACCACCGCTGAGCAGCTGGAGAAACTCTCAGAAAAAAACAACCTTTTAGAAAGTTCACTATGTGATGTGAATGCTGAGCTGGAAGGATTAAGGATTAAGTCAAAGATTTTAGAAGACTCTTGTCTGTTGCTTGACCATGAGAAGTCCAGTCTCACCTCTGAGAAAGAAACCTTAGTTTCACAATTGAACATCACTCATCAAACTCTGAAAGATCTTGGGAAACAACACAATGAATTGGAACTGAAGCATTCTGAACTGAAAGCAGAAAGGGAGTCTGCACTTCAAAAGTTGGAAGAGCTACTTCTTTCCTTATATGCTCAGAGGGAAGAGCATTCCAGAATTGTGCAATTGAATGAATGTCACTTGGCTGAGAAGGAATTACAAATTTTTGTTCTTCAGGAAGATGCAGATTACCAGAAAAAGGAATATGAAGAGGAACTGGACAGATCTATACGTGCTCAAATGGAAATTTTCATCTTGCAGAGATGTATCCAGGATTTGGAGCAAAAGAACTTCTCCCTTCTAGTTGACAGTCAGAGACTTTTGGAGGCTTCCAAACTGTCTGATAGATTGATATCTAAATTGGAGGATGACAACGTTCAGAAGCAAGTTGATGTTAATTCATTGTCTGAGAGAATTAAAATACTGAGGATTGGTCTGCTTCAGGTCTTAAAGACTCTTGATGTTAACAGTGAGCCTTTGTGTGAAAATATGATTGAAAAGGACCAGGAGTTTATGAACCATATACATGGGAAGCTTCAGGAGAAACAGAATTCTTTTGTCACAATTTTCAATGAAAGCCAGCAAGTGGCCATTGAGAACTCAATTCTTGTTACATTCCTTGGCCAGTTGAAATTAAAGGCTGAAAATCTTTTGACAGAAAGAAATTCGCTAGATAAGGAGCTGAGAACCCAGTCTACGCAGTTCTTGGCATTGCAAGCAGAGGTACAAAAGATATTGGAGAAGAATCAGGAATTGAAGTTGACAATAAGCAGAGGAGAAGATAAAATGGAAGTAATGGCTACTCACATAGAGAATCTATGCAAACAGCTGTTAGACTTGAAAGAGGATCGCCAAAACATAAAGGAAGAAAGTTACAAAACCTTTGAAGAGAAAAATTCCTTGATGAGAAGATTTCTGGACTTGGGTGAAGAGAAAAGTAAGTTGGAAGATGAAATCTGCATTATGATTCATGAGACAATAGCACAATCTAATCTCTCGCTAGTCTACCAGAACATTGTCTTCGAAAAACTCCTGGCACTTAAAGAACTAAGCAACGATCTCAATAGACTTTGTTCAGTAAATACCGACCTTGAGGAGAAACTAAAAGTATTGATGGGTAAATTAGAAGATATAGAAATGGAAAACTCCGATCTTAAAGAGTCCTTTGCAGTGTCAAGCATTGAACTAAAATTAGTTCAATCCGTTAATGATCAATTAAATTGTCAGATCAGGAATGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGATTTTGGAAGCAGCAGAGATGTTTAGTGTTTTACAAGATGAGAAAACAGAATTGCAAAGACTGGTCGAAGTTCTGAAGGGCAAGTATGATGAAGCCAGGGTGATACTTGAAGACCAAGCTAGTCAAATTTTAAAATTATCCACCCACAAGGATCGGCAAAATGATGAACTTGGATGCCTTGGTGAAGTGAATAAGAAGTTGGAGGCGGAAATGAGGCATCTGCACCAAGAACTTAGAGAAATTAAACTGAGGGAAGAGAAGCTAACTCACGAACTACTTAAGGGAACAAATGAGATTAAACAATGGGAAACTCAGGCTGCCACACTCTATACCAGACTGCAGATGTCAGCTGTCAATGAGACATTATTTGAAGAGAAAGTCCGGGAGCTAGCTGATGCATGTGAAGATCTTGAATGCAAAAGCAACTTTACAGGGATGGAAAGTGAAGTGCTGAAAGAAAGAGTTAACAAGTTGGAAGGTGAAAATGTGAAACTACGGGATCAGTTGGCTGCTTATGTTCCAGCTGCCAGTGCTTTGAATGATTGCATCACATCCTTGGAGCTGCAGACACTTGGGCATGCAAAACCATATGAATACAAAGTACCAAAGGTTAAGGATTTGGCATATCACAAATACTCTGAAGGTGGTCCACAAACAGGTGAAGATCAGAATACTGCGGCAACTAATGCACTTCCAGATTTCCAAGATATGCAGAAAAGAGTCAATGCAATTGTAATGGCTGTTAAACAGATGAATGAAAGTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTGTTAAAATCTGGATTCAGCCGGCGCCAAGGAAATATTCAGGCAAATAAGTATGTTACTGAAATGCATGAAGCGAAGGAGCAGTATCAAGGTCGACCTTCTGATGAACTGAAGTCAAAAAGATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTCCTGCCAAAAGACATCATGCTTGATCAAACGTCTGAATGTTCATATGGGATAAGTAGGAGAGGAACTCTTGAGACTGATGATCAGATGCTTGAATTGTGGGAAACTGCTAATAAGGATGGTGTTATTGGCCTGACAGTTGGCAAGGCGCAGAAGACAGCCATTGTGCCTACAACATACCAGCAAAAGAGAGCAACCAAGGAACTCAGAAACAAATATCCATCAATAGAGTCCTTGATTGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCCCAAGAAGATTGACACTGCCACATTCACATGAAGAAGGCAACAGGAGGAAGATTTTTGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAACCTTGAAATTACCGTGCAGGATTTGATGAGCAAGCTAGAAATTACTGAGAGCACAAAAGGAAAAGATATTGAGTACAATACGGTGACAGGGCAGCTTGAAGCTACTCAGGAAGCCATCACAAAGTTGTTTGATGCCAACAAGAAGTTGAAGAAGAATGTAGAAGAGAGTACGTCATCCTTTGCTGGGAAGTCTACAGCAGAATCAGATGAGAGTGTAAGTGTCAGCAGAAGGAGAGTTTCAGAACAGGCTCGGAGAGGGTCTGAAAAGATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAACTTTTACTTCTAAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAGACAATGATGGATGAACGAAACTCAAAAGTCCTTTTGCGAGATTATCTCTATGGTGGTGGGACGAGAAGAAACTATCACAAGACGAAGAAGAAAGCACCCTTTTGTGCATGCATGCAGCCTCCCACTAAGGGAGATTAA 5424 0.3999 MDSKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPAPADDSPGVSYMETEPHTPEALSFSHSFLDSVELQKDASPSFHAIKRNGSYTDETDCGLSRKGLKQLNDLFMSGEPVSHAKSSEGRVRRGLNFHDTEQINEQDNGSQDIRTLILSESERMTKAETEILALKKALANLESEKEAGLLQYQQSLERLSNLESEMSRARENSQGLNERANKAEAEVQTLKEALDELQAEREVSLLEYQQCLEKIYHLEKNISSAQKDVGELNERATRAETESESLKQDLARVEAQKEVALVQYNQSLELLSKLEERLVQAEENKKRINEQANAAKIEIDSMKLEIAKLTEEKEDAAHRYQQCMEIISSLEHKLSCALEEVHKLKCKIHDGVEKLNSSEQKCVLLETSNQTLQSELQSLVQKLGSQNEELSEKHKELGRLWTCIQEERLRFIEAETAFQTLQNLHSQSQEELRSLATELHGKAEILENMESRKQALEDEAHKAREENKTLNELKLSSSLSIKRMQDEILNLREIIKKLELEVGIQVDERNALQQEIYCLKEELNDLKKIHESMVEDVRSTDLELQCFASSVKNLQDENSKLKERSETYKDEKAALKEKVEIMETLLEKNAVLERSLLDLTVELESARGKVKILEETCESLLGEKSTLAAEKATLFSQLQTTAEQLEKLSEKNNLLESSLCDVNAELEGLRIKSKILEDSCLLLDHEKSSLTSEKETLVSQLNITHQTLKDLGKQHNELELKHSELKAERESALQKLEELLLSLYAQREEHSRIVQLNECHLAEKELQIFVLQEDADYQKKEYEEELDRSIRAQMEIFILQRCIQDLEQKNFSLLVDSQRLLEASKLSDRLISKLEDDNVQKQVDVNSLSERIKILRIGLLQVLKTLDVNSEPLCENMIEKDQEFMNHIHGKLQEKQNSFVTIFNESQQVAIENSILVTFLGQLKLKAENLLTERNSLDKELRTQSTQFLALQAEVQKILEKNQELKLTISRGEDKMEVMATHIENLCKQLLDLKEDRQNIKEESYKTFEEKNSLMRRFLDLGEEKSKLEDEICIMIHETIAQSNLSLVYQNIVFEKLLALKELSNDLNRLCSVNTDLEEKLKVLMGKLEDIEMENSDLKESFAVSSIELKLVQSVNDQLNCQIRNGKELLSQKENEILEAAEMFSVLQDEKTELQRLVEVLKGKYDEARVILEDQASQILKLSTHKDRQNDELGCLGEVNKKLEAEMRHLHQELREIKLREEKLTHELLKGTNEIKQWETQAATLYTRLQMSAVNETLFEEKVRELADACEDLECKSNFTGMESEVLKERVNKLEGENVKLRDQLAAYVPAASALNDCITSLELQTLGHAKPYEYKVPKVKDLAYHKYSEGGPQTGEDQNTAATNALPDFQDMQKRVNAIVMAVKQMNESFKTKDEMREIQVLKSGFSRRQGNIQANKYVTEMHEAKEQYQGRPSDELKSKRSVSDVPVAEIEVLPKDIMLDQTSECSYGISRRGTLETDDQMLELWETANKDGVIGLTVGKAQKTAIVPTTYQQKRATKELRNKYPSIESLIEKELSVDKLEIPRRLTLPHSHEEGNRRKIFERLDSDAQKLTNLEITVQDLMSKLEITESTKGKDIEYNTVTGQLEATQEAITKLFDANKKLKKNVEESTSSFAGKSTAESDESVSVSRRRVSEQARRGSEKIGRLQLEVQRLQLLLLKLNDEKEGKGKTMMDERNSKVLLRDYLYGGGTRRNYHKTKKKAPFCACMQPPTKGD 1807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03176 1807 Coils Coil 1271 1298 - -
Spst1g03176 1807 Coils Coil 1054 1074 - -
Spst1g03176 1807 Coils Coil 902 922 - -
Spst1g03176 1807 Coils Coil 991 1039 - -
Spst1g03176 1807 SUPERFAMILY Tropomyosin 204 470 - -
Spst1g03176 1807 MobiDBLite consensus disorder prediction 1701 1732 - -
Spst1g03176 1807 Coils Coil 1736 1756 - -
Spst1g03176 1807 Coils Coil 1131 1172 - -
Spst1g03176 1807 MobiDBLite consensus disorder prediction 1716 1732 - -
Spst1g03176 1807 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 58 IPR011684 GO:0003779
Spst1g03176 1807 Coils Coil 510 544 - -
Spst1g03176 1807 Gene3D - 193 362 - -
Spst1g03176 1807 Coils Coil 1678 1698 - -
Spst1g03176 1807 Coils Coil 440 471 - -
Spst1g03176 1807 Coils Coil 1082 1102 - -
Spst1g03176 1807 MobiDBLite consensus disorder prediction 1701 1715 - -
Spst1g03176 1807 Coils Coil 195 215 - -
Spst1g03176 1807 Coils Coil 779 813 - -
Spst1g03176 1807 Coils Coil 398 418 - -
Spst1g03176 1807 Pfam KIP1-like protein 1 52 IPR011684 GO:0003779
Spst1g03176 1807 Coils Coil 1644 1664 - -
Spst1g03176 1807 PANTHER PROTEIN NETWORKED 4A 249 347 - -
Spst1g03176 1807 Coils Coil 223 390 - -
Spst1g03176 1807 Coils Coil 1355 1375 - -
Spst1g03176 1807 Coils Coil 552 600 - -
Spst1g03176 1807 Coils Coil 615 694 - -
Spst1g03176 1807 Coils Coil 1187 1221 - -
Spst1g03176 1807 MobiDBLite consensus disorder prediction 70 90 - -
Spst1g03176 1807 Coils Coil 702 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03176 Spst-Chr1 40227551 40233064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03176 - - gmx:100810726 2848.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03176 1 40227551 40233064 Spst1g03176 1 40227551 40233064 ECH
Spst1g03176 1 40227551 40233064 Spst7g01262 7 41900296 41907038 PCT