Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01253 ATGCTGCTCAGAAACAGATCAAGAGCTGTGACCAAGCCTAGTTTGATGGGTGATCACAGCTCCCAGCCATGTCCAAATCAGAGTTACAAAAGAACCATCCCGTCTTTGTTTTCACCAAAATTCCGTGACTTCTCAGTGAAATGTCTCTCAGGAGCTGAGGCTTTGAGAAGCCCCACATCGATCCTTGACACCAGAGCCTTAACCCCATTTGGGAATCCTTTGTCATATGAGAAGAAGATCGAGACTTTTGGCTCCCCAAGAATACCCTCAGAAAACAGAAGTTCGTGGGACTCAAAAGGCATTGGTCTTGCTCTTGTTGGTGCACTTAAAGATGAACCTCTTCCCCACAATTCAACTAAACCAAGTAGTGCAAGTGTTCTCTTTGGAACCAAACATAGGGTGAAAATCCCTCCCCTGGCACTGCCACTACCACCACCTTCATCATCAGAATCAACTGAAACCTCTGCTGCTGCTAGTTTTGCTGCCAAATCCAAGGATTCGCAAAAGCATGCAAATGATTCTCCATTATCGGTTGCAACAGGTGTTATGAGTCTGAGTGAGATGGAGCTTTTTGAGGAGTACACGTGTGTGATATCTCATGGACCTAATCCTAGAACAACACATATATTCGACAATTGTATAGTGGAAAGCTACTGTTCCCTCCCCAATAACCCTCTCTCATCTTCACACAATTTCCTTAGCTATTGCCACACTTGCAAGAATCATCTTGAGCAGACAAAGGACATTTTTATTTACAGAGGTGAGAAAGCTTTCTGCAGCAAAGAATGTCGCCACCAAGAGATGATGCTAGATGAAGCAGGAATTTCAGAATTTGACAAATACTAA 846 0.4374 MLLRNRSRAVTKPSLMGDHSSQPCPNQSYKRTIPSLFSPKFRDFSVKCLSGAEALRSPTSILDTRALTPFGNPLSYEKKIETFGSPRIPSENRSSWDSKGIGLALVGALKDEPLPHNSTKPSSASVLFGTKHRVKIPPLALPLPPPSSSESTETSAAASFAAKSKDSQKHANDSPLSVATGVMSLSEMELFEEYTCVISHGPNPRTTHIFDNCIVESYCSLPNNPLSSSHNFLSYCHTCKNHLEQTKDIFIYRGEKAFCSKECRHQEMMLDEAGISEFDKY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01253 281 PANTHER FCS-LIKE ZINC FINGER 8 3 274 IPR044593 -
Spst7g01253 281 MobiDBLite consensus disorder prediction 140 175 - -
Spst7g01253 281 MobiDBLite consensus disorder prediction 146 162 - -
Spst7g01253 281 ProSiteProfiles Zinc finger FLZ-type profile. 231 275 IPR007650 -
Spst7g01253 281 MobiDBLite consensus disorder prediction 1 29 - -
Spst7g01253 281 MobiDBLite consensus disorder prediction 14 29 - -
Spst7g01253 281 Pfam zinc-finger of the FCS-type, C2-C2 228 273 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01253 Spst-Chr7 40796956 40797891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01253 - - gmx:100811607 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01253 7 40796956 40797891 Spst7g01253 7 40796956 40797891 ECH
Spst1g03185 1 40320862 40322513 Spst7g01253 7 40796956 40797891 PCT