Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03185 ATGGGGAGGAAGAGGCAGGAACTGCATGTGCTTGGTAACCAAACAAAGCTCAAGAGTTCATCAAATGGCAGAGCTGCTGCTGATCACATGCCTTTCACTACTTTTTCTCATTCAATATCAAAATTGACAAAAAAGATAACCGAGGAGGCAATTCTGTTTTCAGTTTTTGTGTTGTTTAGAACCTGCATCTGTGTGAGTGGTTTGTTATTGCTAGTGCCATCACTCCCTATAACCATTTTGGGAGTTAATTTTCCGTTCGGGATCTATTTCGTTCCACTTATGCTGCTGAGGAACAGATCAAGAGCAGTGAGCAAGCCAGGTTTGATGGCTGATCATAGCTCTCAGCAATCCCCCAATCAAAACTATGCTAAAACTATACCATCTCTATTTGGATCACCAAAATTCAGAGATTTCACCAACAAGTGTCTCTCCTCAGGAACCGAGGCCTTAAGGAGTCCAACCTCTATTCTTGATGCCAGAGCATTATCCCCTTTTGCCTTTGGAAATCCATTCTCAACCCTTCCAAACAAAATATGCCCTCCAAACAGAACCTCCTGGGACAAGCCTGATTCAAAGGGCATTGGTCTTGCTCTTGTTGGTGCTCTCAAAGATGATGATAACCCAATTCATGACAATTATGAGCCCAACAAAGGAAACGTTCTGCTTAGAGTGAAAATCCCTTTTGAGTCTCAGACATGTGCAGGTGATTTTGGAACCAAAACCAAGGATTCAAAAAACTCATCAAGGTCAGGAGTTTGTGCAAAAGATGATTGTGCTTCACCAAGTGTAAGGGCTGTGTCTTGGAGTGAGATGGAGCTTTCGGAGGAATATACATGCGTGATATCTCATGGACCTAACCCAAAAACCACACACATATTCAATAATTGCATTATGGTGGAGACCTTTTATGCTCTTCCCCAAAACCAAAACTCTCATTCTGCAACCTCCGCAAATTTCCTCAGCTTCTGTCACACTTGCAAGAAATATCTTGACCAGACCAAGGACATCTTTATTTATAGAGGAGAGAAAGCTTTCTGTAGCAGGGAATGCCGCCACCGAGAAATGGTGCTGGATGGAATAGAAAATTTAGAGTTTGAAAGCAATGGTTTTTATTGA 1116 0.4211 MGRKRQELHVLGNQTKLKSSSNGRAAADHMPFTTFSHSISKLTKKITEEAILFSVFVLFRTCICVSGLLLLVPSLPITILGVNFPFGIYFVPLMLLRNRSRAVSKPGLMADHSSQQSPNQNYAKTIPSLFGSPKFRDFTNKCLSSGTEALRSPTSILDARALSPFAFGNPFSTLPNKICPPNRTSWDKPDSKGIGLALVGALKDDDNPIHDNYEPNKGNVLLRVKIPFESQTCAGDFGTKTKDSKNSSRSGVCAKDDCASPSVRAVSWSEMELSEEYTCVISHGPNPKTTHIFNNCIMVETFYALPQNQNSHSATSANFLSFCHTCKKYLDQTKDIFIYRGEKAFCSRECRHREMVLDGIENLEFESNGFY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03185 371 PANTHER FCS-LIKE ZINC FINGER 8 96 362 IPR044593 -
Spst1g03185 371 ProSiteProfiles Zinc finger FLZ-type profile. 318 362 IPR007650 -
Spst1g03185 371 Pfam zinc-finger of the FCS-type, C2-C2 310 358 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03185 Spst-Chr1 40320862 40322513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03185 - - gmx:100788456 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03185 1 40320862 40322513 Spst1g03185 1 40320862 40322513 ECH
Spst1g03185 1 40320862 40322513 Spst7g01253 7 40796956 40797891 PCT