Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01230 ATGGAGCTCAGTAAAGTCACCCTAGAGATCTTCTCCAAGCTCGAACGCAAATGGCTCTCACATTGTAAAGCCAACAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCTCCGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTCTTCGCACCTCCGATCCCCACGCTCAGGTTGCCGATTTCTTCGACATCATCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGAAGCATCTGGCAGGCCGCTCTATACGGCCAGAGAAGCCGTCGGTCTCCTCTCCGAGAGGAACTCCGAACTCTACAAGCTTAAATCCGCCGGCGTATTCCGCCGGGGCCGGAGATTCTCCTCCACGAGCATGGACAACGTGTTGAAGCAAGTATTCCAGAGGAAGGAGGATGGCCGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTCCTTATCCCATGCTTTGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGTCGCGCCACGTCAGCAACGCCGAGCCATTTCAAGCCATTCGACTTCGCTTCCATCGACGGCAAGACCTCATGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCTACGGCGGCGGCGGTCACGCACGTTCTCCACAACAAACACGATTTCCCGTCGGTAAACGGAGTGGAGGATCTCCTGGTCCTTTCCTTGGGGAACGGATCGTCGAACACCAAGGTACGCGAGAATCGCTCGTGCTCCACACCCTCGGTGGTTGACATTGTCCTTGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCCTTCGGTTTGGGAAGCGAAACAGTGAGGAAGGAGGAGGTGCTGAAAGAGAGAGGACTCGAGTCGTTACCATTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATTGATAACTTCGTGCAACGCCTTGTTGCAACCGGAAAATCAAGCCCGCCGTCTAGTCCGTGCAAGGAATCCACCGTCAACCCTCTCGCTAACGGCCGCTAG 1140 0.5719 MELSKVTLEIFSKLERKWLSHCKANNKTRILSIDGGGTSAIVAGEALIYLEDQIRLRTSDPHAQVADFFDIIAGTGIGAILAAMITAGEASGRPLYTAREAVGLLSERNSELYKLKSAGVFRRGRRFSSTSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDFASIDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKHDFPSVNGVEDLLVLSLGNGSSNTKVRENRSCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSETVRKEEVLKERGLESLPFGGKRLLTETNGNRIDNFVQRLVATGKSSPPSSPCKESTVNPLANGR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01230 379 SUPERFAMILY FabD/lysophospholipase-like 26 310 IPR016035 -
Spst7g01230 379 Gene3D Cytosolic phospholipase A2 catalytic domain 17 362 - -
Spst7g01230 379 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Spst7g01230 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Spst7g01230 379 PANTHER PATATIN-LIKE PROTEIN 6 1 370 - -
Spst7g01230 379 MobiDBLite consensus disorder prediction 357 379 - -
Spst7g01230 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01230 Spst-Chr7 40144305 40145565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01230 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 71.429 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01230 - - gmx:100777557 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01230 7 40144305 40145565 Spst7g01230 7 40144305 40145565 ECH
Spst1g03203 1 40529100 40530387 Spst7g01230 7 40144305 40145565 PCT