Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03203 ATGGAGCTTAGCAAAGTAACGCTAGAGATCTTCTCCAAACTCGAGCAACAATGGCTTTCCCACTACGAAGCCACGTCCAAAACCCGCATTCTCAGCATCGACGGCGGAGGAACCACTGCCATTGTCTCCGCTGCAGCCCTCGTCCACCTCGAGGACCAGATCCGCGCCCAAACCTCCGATCCCCACGCGCAAATCGCCGATTACTTCGACATCATCGCCGGAACCGGCATTGGAGCCATCCTCGCCGCCATGATCACCGCTGACGACGGCTTCGGCAGGCCTCTCTACACCGCCCGTGACGCCGTCCGCTTCGTCACCGAGAACAACCGCGAACTCTACAAGCCGAAGCGCTCTGGTGTGTTCCGCCGCCGCCGGAGATTCTCCGCGCGGAGCATGGAAAACGCGCTGAAGCGGGTTTTCCAAAGAAAAGAGGAAGAACGACGGTTGTTGACTCTGAAGGACACGTGTAAGCCTCTGCTCATCCCTTGCTTTGACCTCAAGAGTTCTGCGCCATTCGTGTTCTCCCGAGCCGACGCGTCCGAGTCACCCAGTTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCAGCCACGCCTGGCCTCTTTGCGCCGTTTCACTTCGCCTCCGTCGATGGAAAGACGTCGTGCGCCGCCGTCGACGGCGGCCTGGTGATGAACAATCCGGCCGCGGCTGCGGTCACGCACGTCCTCCACAACAAGCGTGACTTCCCGTCGGTTAACGGCGTGGAGGATCTCCTCGTACTCTCGATCGGAAACGGAGCGCCGGCTAAGAGAGTGAACACCGCCGGTGAGTGTTCCACGTCCGCGGTGGTTGACATTGCGCTCGACGGCGTTTCCGAGACCGTTGACCAGATGTTAGGGAACGCTTTCTGTTGGAACCGTACGGACTATGTCAGGATTCAGGCGTTCGGTTTGGGAGAAGGAAAAGAAGAGAAAGTGCTAAACGAGAGAGTCTTGGAATCGTTACCGTTTGGGGGGAAACGGTTACTGCAGGAAACTAACGGTAACAGAATCGAGAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAGACGAGTCTGCCACCTAGTCCCTGCAAGGTGCCACCGTAA 1113 0.5822 MELSKVTLEIFSKLEQQWLSHYEATSKTRILSIDGGGTTAIVSAAALVHLEDQIRAQTSDPHAQIADYFDIIAGTGIGAILAAMITADDGFGRPLYTARDAVRFVTENNRELYKPKRSGVFRRRRRFSARSMENALKRVFQRKEEERRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGLFAPFHFASVDGKTSCAAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRVNTAGECSTSAVVDIALDGVSETVDQMLGNAFCWNRTDYVRIQAFGLGEGKEEKVLNERVLESLPFGGKRLLQETNGNRIESFVQRLVATGKTSLPPSPCKVPP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03203 370 Gene3D Cytosolic phospholipase A2 catalytic domain 17 361 - -
Spst1g03203 370 PANTHER PATATIN-LIKE PROTEIN 6 1 367 - -
Spst1g03203 370 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Spst1g03203 370 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Spst1g03203 370 SUPERFAMILY FabD/lysophospholipase-like 27 314 IPR016035 -
Spst1g03203 370 CDD Pat17_PNPLA8_PNPLA9_like 30 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03203 Spst-Chr1 40529100 40530387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03203 1 367 Acyl Lipid Metabolism Gene Families AT3G63200 70.241 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03203 - - gmx:100806989 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03203 1 40529100 40530387 Spst1g03203 1 40529100 40530387 ECH
Spst1g03203 1 40529100 40530387 Spst7g01230 7 40144305 40145565 PCT