Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01197 ATGTTCTACAAAACCAAAACCCACACTCTTCTCTACCTTAACAACGCAAGATCTATATCAAGTCTCAAAGTAGTGTGGCGCAAGGACCCAACACTCGATCGAGCTATAGAGCACGACAAGCGTTACAAGCAATGTGCCCGCGTCGTCAAGGAAGTCCTCAACGAACCCGGCCAAGTCATCCCTCTCCGCTACCTCGAAAAGCGCCGCGAAAGGATGCGCCTCAAGGTCAAAGCCGAAACCTTTCTCAACCAAAACCCTGGCTTGTTCGATGTCTACTATGACCGCATCAAACCCAAAACCGAACCGGTTCGGTTCATCCGCCCCACCGACCGCCTTCGCCGCTTTCTCCAGGAAGAACAACGGATTTTCTCCGAGAACGAACCCTTCATTGTCTCAAAGTTGTGTAAATTGTTAATGATGTCCAAGAACAAGGTTGTTAGTGCTGATAAGTTGCTTCACGTGAAGAGAGAGTTCGGGTTCCCTAACGATTTTTTGGTTGATTTGGTTCCCAGGTATCCGCAATATTTTAGGTTAACTGGGTCTCCTGGGGAGGGGAAATCGTTTCTTGAATTGGTTAATTGGAATTCCGAGTTTGCAAAATCTGTTATTGAGGAGAGGGCTGATGAGGAGGGTGAGCGTTTGGGAATTAAGGTTAGGCCTAGTTTCAATGTGGAGCTTCCAGCAGGGTTTGTGTTGAAGAAGGAGATGAGGGAGTGGGTTAGGGATTGGATGGAGCTTGATTATGTGTCTCCTTACGAGGATGTGTCCCATTTAGACCAGGCTTCTAGAGAGATGGAGAAGAGGTCCGTTGGAGTGTTCCACGAACTGCTTTCTCTTTCCTTGCATAAGAGGATTCCTGTGCCGATCCTTGGAAAGTTTTGTGATGAGTATAGGTTTTCCAATGCGTTTTCCAGCACTTTTACAAGGCATTCGGGGATATTCTATTTGTCCTTGAAAGGTGGGATTGAAACGGCAGTGTTGAGAGAAGCATACAGAGTTGAGGAGTTGGTTGACCGCGATTCGTTGCTTCAGATAAAAGATAAGTTTGTTGAGTTGTTGGAGGAGGGGTGGCGGCAAAGAGCGGAGCAATTGAGATTGAAGCAGGAGAAGATTAAGGAAGATATGGAGCTATTGGCCACCAAAGTTTGTGATTGA 1155 0.4684 MFYKTKTHTLLYLNNARSISSLKVVWRKDPTLDRAIEHDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKVKAETFLNQNPGLFDVYYDRIKPKTEPVRFIRPTDRLRRFLQEEQRIFSENEPFIVSKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPQYFRLTGSPGEGKSFLELVNWNSEFAKSVIEERADEEGERLGIKVRPSFNVELPAGFVLKKEMREWVRDWMELDYVSPYEDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDEYRFSNAFSSTFTRHSGIFYLSLKGGIETAVLREAYRVEELVDRDSLLQIKDKFVELLEEGWRQRAEQLRLKQEKIKEDMELLATKVCD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01197 384 Coils Coil 361 381 - -
Spst7g01197 384 Pfam Plant organelle RNA recognition domain 28 357 IPR021099 GO:0003723
Spst7g01197 384 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 18 370 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01197 Spst-Chr7 36713920 36715074 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01197 - - gmx:100778092 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01197 7 36713920 36715074 Spst7g01197 7 36713920 36715074 ECH
Spst1g02603 1 34479187 34480395 Spst7g01197 7 36713920 36715074 PCT