Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02603 ATGAACAAAAATGGCGTCATTCCGTGGATGAAACAGCAATGGCGGGGCATAGTGAAAGTGCGTTTGAAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGACAAGGAAACCGATCTCAAAGCGGCGTGCCTCCTCAAGGACGCCATCAACCGCTCCTCCACCGCCTTCCTCACGGCGAAATCTGTCGCTGACTGGCAAAAGCTCCTCGGTCTCACCGTTCCTGTCCTTCGCTTCCTCCGCCGGTACCCCACCCTCTTCCACGAGTTCCCCCACCCGCGCTGGCCCTCCCTTCCCTGCTTCCGCCTCACCGACACCGCTCTCTTCCTACACTCCCAGGAACTCGCACTCCACCAAACCCACCAAAACGACGCCATTGAACGTCTTTCCAAGCTCCTCATGATGACCCACTCACGCGCCCTCTCCATCCACTCTCTCCACGCGCTCAAGTGGGACTTTGGTTTACCCGACTCCTTCGACAAAACCCTCGTCTCCAACTTCCCTAACGACTTCCAATTCGTCAAGTCACCCAACGGCATCGTTTCACTCAAACTAGCACGATGGCCTGAGGAACTCGCTGTTTCCGCGCTGCAGAAGAGAAACGAGTGTGGGACCCACTACCGTGAATTCAAGCGGGGACAATCGGCGCTGGCTTTTCCGATGAAGTTTCCGAGGGGTTACGGCGCGCAGAGGAAGGTGAGGACGTGGATGGAGGAATTTCAGAAGCTGCCTTATGTTTCCCCCTATGCTGATTCCTCCAAGATTGATCCTAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCACGAGCTTTTGAGTTTGACTCTACACAAGAAAACCAAGAGGAACTACTTGAGGAGCTTGAGGGAAGAGTTGAATCTTCCGCACAAATTTACCCGGATTTTCACTAGGTATCCCGGCATCTTTTACCTCTCGTTGAAGTGTAAAACCACCACTATTACTCTCAGGGAAGGGTACCAGAGTGGGAAACTGGTGGACCCGCACCCTCTTATTCGACATAGAGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTCTATCGCGGGGATGGGTCATTGAAACACGAGGAGAACAATTCGTTGGTTGAAAATGATGAACTAAGAAGTGAGGAATCTGAGGAGGAAGGGATTGAAACGGGTGATGAATTGTGCGAGGGTGAAACTAGTGATGAACTCTGCTAG 1209 0.5285 MNKNGVIPWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHPRWPSLPCFRLTDTALFLHSQELALHQTHQNDAIERLSKLLMMTHSRALSIHSLHALKWDFGLPDSFDKTLVSNFPNDFQFVKSPNGIVSLKLARWPEELAVSALQKRNECGTHYREFKRGQSALAFPMKFPRGYGAQRKVRTWMEEFQKLPYVSPYADSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLIRHRDKFYRVMQTGLLYRGDGSLKHEENNSLVENDELRSEESEEEGIETGDELCEGETSDELC 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02603 402 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 379 IPR045040 GO:0003723
Spst1g02603 402 MobiDBLite consensus disorder prediction 366 402 - -
Spst1g02603 402 Pfam Plant organelle RNA recognition domain 25 353 IPR021099 GO:0003723
Spst1g02603 402 MobiDBLite consensus disorder prediction 376 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02603 Spst-Chr1 34479187 34480395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02603 - - vun:114164383 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02603 1 34479187 34480395 Spst1g02603 1 34479187 34480395 ECH
Spst1g02603 1 34479187 34480395 Spst7g01197 7 36713920 36715074 PCT