Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01196 ATGGGTGCCTCTCAATCAGTCTCAGAAAATTCCATCCATGAATTCACTGTCAAGGATGCCAGAGGCAAAGATGTGAACCTCAACGCCTACAGGGGCAAAGTTCTTCTTGTAGTTAATGTTGCTTCAAAATGTGGATTTGCGGAGGCCAATTACACCCAGTTAACTCAGCTTTATTCCACATACAAAAGCAGGGGTCTTGAGGTTTTGGCATTTCCATGCAACCAGTTTCTGAAGAAAGAGCCAGGGACTAACCAGGAGGCACAAGACTTTGCATGTACAAGGTATAAGGCTGAGTATCCCATTTTTGGGAAGATTCGTGTGAATGGATCAGATAGTGCACCTGTATACAAATTCCTGAAAGCCCAGAAATCTGGATTTGCAGGATCAAGAATCAAATGGAATTTCACCAAGTTTTTAGTTGATGAAGAAGGCCATGTCATCCACCGTTATAGCCCAACCACTAAGCCATTAGCCATTGAAAATGACATCAAGAAAGCATTACGGGTGGCTTGA 513 0.4308 MGASQSVSENSIHEFTVKDARGKDVNLNAYRGKVLLVVNVASKCGFAEANYTQLTQLYSTYKSRGLEVLAFPCNQFLKKEPGTNQEAQDFACTRYKAEYPIFGKIRVNGSDSAPVYKFLKAQKSGFAGSRIKWNFTKFLVDEEGHVIHRYSPTTKPLAIENDIKKALRVA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01196 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Spst7g01196 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Spst7g01196 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 FunFam Glutathione peroxidase 3 169 - -
Spst7g01196 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 PANTHER GLUTATHIONE PEROXIDASE 6 167 IPR000889 GO:0004602|GO:0006979
Spst7g01196 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Spst7g01196 170 Gene3D Glutaredoxin 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01196 Spst-Chr7 36703121 36704276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01196 - K00432 gmx:100527283 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01196 7 36703121 36704276 Spst7g01196 7 36703121 36704276 ECH
Spst1g03227 1 40792639 40796193 Spst7g01196 7 36703121 36704276 PCT