Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03227 ATGGGTGCTTGTGAATCCGTCTCGGAAAAATCCATCCATGAATTCACGGTCAAGGATGCTAAGGGCAGAGACGTGAGCCTCACCACCTACAAGGGGAAGGTTCTTCTGGTAGTTAACGTCGCTTCAAAATGCGGATTTACGAATACCAATTACACCCAGTTAACAGAGCTTTATAGCAGATACAAAGACAAAGGTCTGGAGATACTAGCATTTCCATGCAACCAATTTCTGAAGCAAGAGCCCGGGAGTAGCCAGGACGCAGAGCAATTTGCCTGTACAAGGTTCAAGGCAGAGTATCCCATTTTTGGAAAGGTACGTGTCAATGGACCCGATACAGTACCTGTCTACAAATTCCTTAAAGCACATAAACCAGGATTTTTGGGTTCTAGGATAAAGTGGAATTTCACCAAGTTTTTGGTTGACAAGGATGGGCATGTCCTCCGGCGTTATGCTCCAATCACCTCACCGTTGTCCATTGAAAATGACATCAAGATGGCATTGGGGATGGCTTGA 513 0.4542 MGACESVSEKSIHEFTVKDAKGRDVSLTTYKGKVLLVVNVASKCGFTNTNYTQLTELYSRYKDKGLEILAFPCNQFLKQEPGSSQDAEQFACTRFKAEYPIFGKVRVNGPDTVPVYKFLKAHKPGFLGSRIKWNFTKFLVDKDGHVLRRYAPITSPLSIENDIKMALGMA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03227 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Spst1g03227 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Spst1g03227 170 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Spst1g03227 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Spst1g03227 170 PANTHER GLUTATHIONE PEROXIDASE 8 165 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Spst1g03227 170 FunFam Glutathione peroxidase 3 169 - -
Spst1g03227 170 Gene3D Glutaredoxin 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03227 Spst-Chr1 40792639 40796193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03227 - K00432 gmx:100306136 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03227 1 40792639 40796193 Spst1g03227 1 40792639 40796193 ECH
Spst1g03227 1 40792639 40796193 Spst7g01196 7 36703121 36704276 PCT